DRSC/TRiP Functional Genomics Resources

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Protein Alignment fab1 and Hrs

DIOPT Version :10

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_525099.3 Gene:Hrs / 33458 FlyBaseID:FBgn0031450 Length:760 Species:Drosophila melanogaster


Alignment Length:496 Identity:93/496 - (18%)
Similarity:183/496 - (36%) Gaps:116/496 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 NVLKHISNIVAT-----KNNNDLRNYKDT---------------ELQRFWMPD-----SKAKECY 193
            ||.:.:..:|.|     ::::..:..|||               |....:..|     :..:.|:
  Fly   101 NVRQKMLELVQTWAYAFRSSDKYQAIKDTMTILKAKGHTFPELREADAMFTADTAPNWADGRVCH 165

  Fly   194 DCSQKFSTFRRKHHCRLCGQIFCSKCCNQVVPGMIIRCDGDLKVCNYC----------------- 241
            .|..:|:...||||||.|||:||.:|..:..|......:.:::||:.|                 
  Fly   166 RCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCFAALQRPTSGSGGAKSG 230

  Fly   242 -----SKIVLTFLKSSSSEMGQ-DMQELQQHLSNKLEVQDSGSSLAKHPQMQRAPLPRKTSVGYQ 300
                 |::...:|.|:.::..| ..::.:|.|..:.|:|.:.:......:.|:..|.......|:
  Fly   231 PRPADSELPAEYLNSTLAQQVQTPARKTEQELKEEEELQLALALSQSEAEQQKPKLQSLPPAAYR 295

  Fly   301 EERFSSHPTYTTLSIDDRKNILQQSNSLITLHEEMQRDLPAQNCGQRLIEFLNSNNKSANEVQAV 365
            .::.|..|.    :..:.|...||               |.:.....|.::|   |:|..|.:.:
  Fly   296 MQQRSPSPE----APPEPKEYHQQ---------------PEEATNPELAKYL---NRSYWEQRKI 338

  Fly   366 AILNAMLAAGFLEPIVPDPEQMDFDSSLHYKFSKSSSSDTSRTMSPQFEANPHAEPQPPKSMDQS 430
            :..::|.:.....|:.|.|:.... ..|..|.:.....|       :|.||...:.:...:..:|
  Fly   339 SESSSMASPSAPSPMPPTPQPQQI-MPLQVKSADEVQID-------EFAANMRTQVEIFVNRMKS 395

  Fly   431 AEEKEKELENELENDRCYTTATSKLLASYCEHEEQLLAQMLRAHNLDQEW-----DKVLQMLCST 490
            ...:.:.:.|:......:.|.||.       |.:||  ..::..:..:.|     ||:.|:..|.
  Fly   396 NSSRGRSISNDSSVQTLFMTLTSL-------HSQQL--SYIKEMDDKRMWYEQLQDKLTQIKDSR 451

  Fly   491 AA-NHFKPEHCSNDLMDIRNYVNFKKVPGGRRKDSKIVHGVAFSKNVAHKDMATHVPFPRILLLQ 554
            || :..:.||..          ..:::...:.:..::  .:|...::..|....::.:.|.|.||
  Fly   452 AALDQLRQEHVE----------KLRRIAEEQERQRQM--QMAQKLDIMRKKKQEYLQYQRQLALQ 504

  Fly   555 CPIVYERIEGKFVTIETVLLQEK---EYLRNVCARIMSFKP 592
            .....||        |..|.||:   :||....|....:.|
  Fly   505 RIQEQER--------EMQLRQEQQKAQYLMGQSAPPFPYMP 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264 20/87 (23%)
DEP 329..397 CDD:214489 11/67 (16%)
Fab1_TCP 464..717 CDD:239450 27/138 (20%)
PIPKc_PIKfyve 1479..1796 CDD:340437
HrsNP_525099.3 VHS_Hrs 4..141 CDD:340771 7/39 (18%)
FYVE_Hrs 157..217 CDD:277260 19/59 (32%)
GAT_Hrs 376..471 CDD:410592 21/120 (18%)
PABP-1234 <501..641 CDD:130689 13/45 (29%)
Blue background indicates that the domain is not in the aligned region.

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