DRSC/TRiP Functional Genomics Resources

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Protein Alignment fab1 and CCT2

DIOPT Version :10

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster


Alignment Length:440 Identity:84/440 - (19%)
Similarity:153/440 - (34%) Gaps:94/440 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   449 TTATSKLLASYCEHEEQLLAQMLRAHNLDQEWDKVLQMLCS--TAA---NHFKPEHCSNDLMDI- 507
            ||:.:.|.:......|:|:.|.|....:...|.:..|:...  |||   |....|...|||::| 
  Fly    99 TTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVALEALTAAAQDNSSSDEKFRNDLLNIA 163

  Fly   508 RNYVNFK--------------------------------KVPGGRRKDSKIVHGVAFSKNV-AHK 539
            |..::.|                                |..||...||.:..|....|.. .|:
  Fly   164 RTTLSSKILHQHKDFFANLAVDAVMRLKGSGELKSIQIIKKSGGTLGDSFLDEGFLLDKKPGVHQ 228

  Fly   540 DMATHVPFPRILLLQCPIVYERIE--GKFVTIETVL------LQEKEYLRNVCARIMSFKPNVVL 596
            ..  .:...|||:...|:..::|:  |..:.::::.      :.|||.::....:|:..|.||.:
  Fly   229 PQ--RIENARILIANTPMDTDKIKVFGSSIKVDSLAKIADLEMAEKEKMKEKVDKILKHKCNVFI 291

  Fly   597 VHKNVAGIAQDLLRSYEVTLVLDVKLSVMERLSRTLQCDIVSSIESNITMPKLGYCNDFYIRNYN 661
            ..:.:....:.|.....|..:.......:|||:.....:|||:.| |.::.|||.|:........
  Fly   292 NRQLIYNYPEQLFADARVMSIEHADFDGIERLAYCTGGEIVSTFE-NPSLVKLGECDVIEQVMIG 355

  Fly   662 GKTLMFFEKLTNPRGYTCLLRGGSNAELTRVKR----------------------------VASA 698
            ..||:.|..:......|.::||.:...|....|                            :|:|
  Fly   356 EDTLLRFSGVKLGEACTIVIRGATQQILDEADRSLHDALCVLAATVKESRIIFGGGCSEALMATA 420

  Fly   699 LLFARYNWRLEMSFLLNEFAQPLSPKPSIFDSKETSPKTETEAELRS-----KRPIILERKSEDK 758
            :|........:.:..:..||:.|...|:...........:..:|||:     |:.:.|:.    :
  Fly   421 VLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGHAQGKQTLGLDM----E 481

  Fly   759 ITTIVSENVSDFTDPLRASQAEALSTSPCAPPVVEALAVEPRYDNRFRTA 808
            :..:........|:.....:...:|.|..|..::       |.||..|.|
  Fly   482 LGKVADVRELGITESFAVKRQVLMSASEAAEMIL-------RVDNIIRCA 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264
DEP 329..397 CDD:214489
Fab1_TCP 464..717 CDD:239450 63/327 (19%)
PIPKc_PIKfyve 1479..1796 CDD:340437
CCT2NP_572524.1 TCP1_beta 10..527 CDD:239452 84/440 (19%)
Blue background indicates that the domain is not in the aligned region.

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