DRSC/TRiP Functional Genomics Resources

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Protein Alignment fab1 and CCT2

DIOPT Version :9

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster


Alignment Length:440 Identity:84/440 - (19%)
Similarity:153/440 - (34%) Gaps:94/440 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   449 TTATSKLLASYCEHEEQLLAQMLRAHNLDQEWDKVLQMLCS--TAA---NHFKPEHCSNDLMDI- 507
            ||:.:.|.:......|:|:.|.|....:...|.:..|:...  |||   |....|...|||::| 
  Fly    99 TTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVALEALTAAAQDNSSSDEKFRNDLLNIA 163

  Fly   508 RNYVNFK--------------------------------KVPGGRRKDSKIVHGVAFSKNV-AHK 539
            |..::.|                                |..||...||.:..|....|.. .|:
  Fly   164 RTTLSSKILHQHKDFFANLAVDAVMRLKGSGELKSIQIIKKSGGTLGDSFLDEGFLLDKKPGVHQ 228

  Fly   540 DMATHVPFPRILLLQCPIVYERIE--GKFVTIETVL------LQEKEYLRNVCARIMSFKPNVVL 596
            ..  .:...|||:...|:..::|:  |..:.::::.      :.|||.::....:|:..|.||.:
  Fly   229 PQ--RIENARILIANTPMDTDKIKVFGSSIKVDSLAKIADLEMAEKEKMKEKVDKILKHKCNVFI 291

  Fly   597 VHKNVAGIAQDLLRSYEVTLVLDVKLSVMERLSRTLQCDIVSSIESNITMPKLGYCNDFYIRNYN 661
            ..:.:....:.|.....|..:.......:|||:.....:|||:.| |.::.|||.|:........
  Fly   292 NRQLIYNYPEQLFADARVMSIEHADFDGIERLAYCTGGEIVSTFE-NPSLVKLGECDVIEQVMIG 355

  Fly   662 GKTLMFFEKLTNPRGYTCLLRGGSNAELTRVKR----------------------------VASA 698
            ..||:.|..:......|.::||.:...|....|                            :|:|
  Fly   356 EDTLLRFSGVKLGEACTIVIRGATQQILDEADRSLHDALCVLAATVKESRIIFGGGCSEALMATA 420

  Fly   699 LLFARYNWRLEMSFLLNEFAQPLSPKPSIFDSKETSPKTETEAELRS-----KRPIILERKSEDK 758
            :|........:.:..:..||:.|...|:...........:..:|||:     |:.:.|:.    :
  Fly   421 VLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGHAQGKQTLGLDM----E 481

  Fly   759 ITTIVSENVSDFTDPLRASQAEALSTSPCAPPVVEALAVEPRYDNRFRTA 808
            :..:........|:.....:...:|.|..|..::       |.||..|.|
  Fly   482 LGKVADVRELGITESFAVKRQVLMSASEAAEMIL-------RVDNIIRCA 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264
DEP 329..397 CDD:214489
Fab1_TCP 464..717 CDD:239450 63/327 (19%)
PIPKc 1413..1797 CDD:295374
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 84/440 (19%)
TCP1_beta 10..527 CDD:239452 84/440 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453446
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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