DRSC/TRiP Functional Genomics Resources

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Protein Alignment fab1 and Pip5k1c

DIOPT Version :9

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_008763323.1 Gene:Pip5k1c / 314641 RGDID:1309938 Length:692 Species:Rattus norvegicus


Alignment Length:591 Identity:125/591 - (21%)
Similarity:183/591 - (30%) Gaps:225/591 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1270 PEQVQTADSSKVTTSSLPKENDPLECPSEDTETGASNSQTVLDKNFSIDQMLASTVNVYSDKKSI 1334
            |::.::|::..||..:           :...|:||:...|                    .||: 
  Rat     6 PDEAESAEAGAVTAEA-----------AWSAESGAAAGMT--------------------QKKA- 38

  Fly  1335 RKILTQLLPSGNQVNPLQSPFPAQDHLTLPLGSIPIHVRETDLSSVIAYSLTSMDYQKAIDEAEA 1399
              ||.:.        ||.:..|...|     |....| |..|.|....|..|             
  Rat    39 --ILAEA--------PLVTGQPGPGH-----GKKLGH-RGVDASGETTYKKT------------- 74

  Fly  1400 NSNAAHSSPQLKRKIPLAESVSDAEDSPSLSRTSSNTSAAPNASVPSPATAASESEEKSKERIKQ 1464
                  :|..||..|.|           .:..|..|.|:.|...|........||.....|....
  Rat    75 ------TSSTLKGAIQL-----------GIGYTVGNLSSKPERDVLMQDFYVVESIFFPSEGSNL 122

  Fly  1465 PPSPHITLAFQDHSCQFQCKIYFAREFDAMRSK-SLKPPKLDKSLYRRLEKSKMREELRISQSRT 1528
            .|:.|    |||    |:.|.|....|...|.. .::|   |..||                   
  Rat   123 TPAHH----FQD----FRFKTYAPVAFRYFRELFGIRP---DDYLY------------------- 157

  Fly  1529 GSEMELVRKPSDVGAPRTTEDDSNQEEDARIALARSLCKSVQWE-ARGGKSGSRFCKTLDDRFVL 1592
                                               |||.....| :..|.|||.|..|.||.|::
  Rat   158 -----------------------------------SLCNEPLIELSNPGASGSVFYVTSDDEFII 187

  Fly  1593 KEMNSRDMTIFEPFAPKYFEYIDRCQQQQQPTLLAKIFGVFRVSVKKKDSFVERSVMVMENLF-Y 1656
            |.:..::....:...|.|:..::    |...|||.|.:|::.|....|:.    .|:||.|:. .
  Rat   188 KTVMHKEAEFLQKLLPGYYMNLN----QNPRTLLPKFYGLYCVQSGGKNI----RVVVMNNVLPR 244

  Fly  1657 GCNIENKFDLKGSERNRLVDPSNQQGEI-VLLDENLVQMSWSKPLYVLSHSKT--VLRDAIQRDS 1718
            ...:..|||||||...|......::..: ...|.:.:|   ..|..:|..|.|  .|...:|||.
  Rat   245 VVKMHLKFDLKGSTYKRRASKKEKEKSLPTYKDLDFMQ---DMPEGLLLDSDTFGALVKTLQRDC 306

  Fly  1719 SFLEKNLVMDYSLLVGL-------------------DKK-------------------------- 1738
            ..||...:||||||:|:                   |:|                          
  Rat   307 LVLESFKIMDYSLLLGVHNIDQQERERQAEGAQSKADEKRPVAQKALYSTAMESIQGGAARGEAI 371

  Fly  1739 ------------NG-----VLVLGIIDYIRTFTLDKRVESIIKGSGILGGKGKDPTVVNPERYKQ 1786
                        ||     :|.:||||.::::...|::|...|.   |...|...:|..|..|.:
  Rat   372 ETDDTMGGIPAVNGRGERLLLHIGIIDILQSYRFIKKLEHTWKA---LVHDGDTVSVHRPSFYAE 433

  Fly  1787 RFIDAM 1792
            ||...|
  Rat   434 RFFKFM 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264
DEP 329..397 CDD:214489
Fab1_TCP 464..717 CDD:239450
PIPKc 1413..1797 CDD:295374 99/448 (22%)
Pip5k1cXP_008763323.1 PIPKc 103..443 CDD:214623 92/416 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5253
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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