DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18635 and xkr8.4

DIOPT Version :10

Sequence 1:NP_611267.1 Gene:CG18635 / 37031 FlyBaseID:FBgn0034279 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_005170156.1 Gene:xkr8.4 / 101882552 ZFINID:ZDB-GENE-120215-27 Length:397 Species:Danio rerio


Alignment Length:190 Identity:36/190 - (18%)
Similarity:80/190 - (42%) Gaps:27/190 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 YIVPTCLGLLVYIVQTASDLALSYQHFRQKEPTLGAGTLVLV-----ILPPVITFILVAASKEQR 89
            |.:.|.:||.::::....|:......: |:|..:..|.::..     :|..|.::|..:.|.::.
Zfish    13 YYLFTWIGLFLFLLDIVMDIRTVVSLY-QEEAYVFMGLMIFFLVGSSVLLQVFSWIWYSDSLDEL 76

  Fly    90 ECACSE--RNKCVALGIGLLKLFLFPFFV-IFRFCTRLFWAIEGLFHDDDDVERMKCLAKATQTS 151
            |....:  :.|.:......|:|.::..:. :....|:||            :::.:...::|..:
Zfish    77 ETEVEKFTKEKKLIKPFHFLQLGVYLRYAGVIEMSTKLF------------LQQRRIFKESTFLN 129

  Fly   152 -NIELLLFVQAYAQAAPQIILQLYHMLVQDMFRNYETSAVQSLSLVFSAIDLAAITTSYH 210
             :.:||...:.:.::|||:||....||     :..|......|..:.||..:|.....||
Zfish   130 LDFQLLGLFETFTESAPQLILMATLML-----QRGELQLFSGLKFLASAASIAFTLAMYH 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18635NP_611267.1 XK-related 34..>211 CDD:462912 35/186 (19%)
XK-related <483..623 CDD:462912
xkr8.4XP_005170156.1 XK-related 16..344 CDD:462912 35/187 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.