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Protein Alignment CG5009 and Ivd

DIOPT Version :9

Sequence 1:	NP_611264.2	Gene:	CG5009 / 37028	FlyBaseID:	FBgn0027572	Length:	669	Species:	Drosophila melanogaster
Sequence 2:	NP_062800.1	Gene:	Ivd / 56357	MGIID:	1929242	Length:	424	Species:	Mus musculus

Alignment Length:	480	Identity:	107/480 - (22%)
Similarity:	173/480 - (36%)	Gaps:	149/480 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 PDLQKERSTATF-NPREFSVLWAGGEERFKEKKALEKLFLEDPALQDDLPISYLSHKELYEHSLR 71
            |..|:...|..| |.|||   |       |:..:|..|.:..|.......:.||.|
Mouse    64 PKAQEIDQTNDFKNLREF---W-------KQLGSLGVLGITAPVQYGGSGLGYLEH--------- 109

  Fly    72 KACIIGEKIRKLRADGEDGVDTYNALLGGSLGSAILKEGNPLALHYVMFVPTIMGQGTMDQQVEW 136
              .::.|:|.  ||.|..|: :|.|                   |..:.|..|:..|...|:.::
Mouse   110 --VLVMEEIS--RASGAVGL-SYGA-------------------HSNLCVNQIVRNGNEAQKEKY 150

  Fly   137 LSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVINTPSLSAYKWWPGGLGHTANHAV 201
            |.|....|.||..|.:|...|:.:..::.:|  :.....:|:|     ..|:|... |..|:..|
Mouse   151 LPKLISGEFIGALAMSEPNAGSDVVSMKLKA--EKKGDHYVLN-----GNKFWITN-GPDADILV 207

  Fly   202 VVAQ--LYTKGEFRGLAPFIVQLRDSDTHRPMPGIDIGDIGTKLGMKGVNNGYLGLKNVRVPLNN 264
            |.|:  |......||:..|||:       :.|||........||||:|.|...|..::.:||..|
Mouse   208 VYAKTDLTAVPASRGITAFIVE-------KGMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAAN 265

  Fly   265 MLMKNQQVLPDGTYVAP-----KNSVLTYGTMMFVRCAL--------IRDT-AQSL-------AK 308
            :|.:..:    |.||..     :..||..|.:..::..|        :|:. .|.:       .|
Mouse   266 VLSQESK----GVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGK 326

  Fly   309 ASTIATRYSAVRRQSPIDPNQPEPQIMDHTTQQLKLFPQIAKAIVFKTTGDGIWNMYNVISGEIE 373
            .:.:.||..|.|:.                                         :|||... .:
Mouse   327 MADMYTRLMASRQY-----------------------------------------VYNVAKA-CD 349

  Fly   374 QGNLDRLPEMHALSCCLKAICSADAAAGVETCRLSC-GGHGYMDCSNFPTIYGMTTAVCTYE--- 434
            :|::  :|:    .|....:.:|:.|..|....:.| ||:||:  ::||....:..|. .||
Mouse   350 EGHI--IPK----DCAGVILYAAECATQVALDGIQCLGGNGYI--NDFPMGRFLRDAK-LYEIGA 405

  Fly   435 GENTVMLLQTARYLVKVYGQALNGE 459
            |.:.|..|        |.|:|.|.:
Mouse   406 GTSEVRRL--------VIGRAFNAD 422

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.