DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5009 and acox1

DIOPT Version :9

Sequence 1:NP_611264.2 Gene:CG5009 / 37028 FlyBaseID:FBgn0027572 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001015762.1 Gene:acox1 / 548479 XenbaseID:XB-GENE-1008078 Length:661 Species:Xenopus tropicalis


Alignment Length:679 Identity:313/679 - (46%)
Similarity:420/679 - (61%) Gaps:44/679 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VNPDLQKERSTATFNPREFSVLWAGGEERFKEKKALEKLFLEDPALQDDLPISYLSHKELYEHSL 70
            :||||.:||:.|:|||...:|:..|..||.:.::.:|.|.|.||:.|.:.| ::||..|.||.::
 Frog     1 MNPDLSRERAAASFNPETITVILDGSPERTRRRREIEGLVLNDPSFQHEDP-NFLSRSERYELAI 64

  Fly    71 RKACIIGEKIRKLRADG-EDGVDTYNALLGGSLGSAILKEG--NPLALHYVMFVPTIMGQGTMDQ 132
            :|:.::   ::|:|..| .|..:.|       ...:.:..|  .||.||..||:||::.|.|.:|
 Frog    65 KKSALM---VQKMREHGISDPEEIY-------WFKSFVHRGRPEPLDLHLGMFLPTLLNQATPEQ 119

  Fly   133 QVEWLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVINTPSLSAYKWWPGGLGHTA 197
            |......||:.||||||||||:||||.||||||.|.||.|||||::|:|::|:.||||||||.|:
 Frog   120 QERLFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPSTQEFILNSPTVSSIKWWPGGLGKTS 184

  Fly   198 NHAVVVAQLYTKGEFRGLAPFIVQLRDSDTHRPMPGIDIGDIGTKLGMKGVNNGYLGLKNVRVPL 262
            |||||:|||||:||.|||..|||.:|...||.|:||:.:||||.|.|....:||:|....:|:|.
 Frog   185 NHAVVLAQLYTQGECRGLHAFIVPIRHMGTHEPLPGVVVGDIGPKFGFDETDNGFLKFDKLRIPR 249

  Fly   263 NNMLMKNQQVLPDGTYVAPKNSVLTYGTMMFVRCALIRDTAQSLAKASTIATRYSAVRRQSPIDP 327
            .|||||..:|.||||||.|.:..||||||:|:|..::.|:|:||::|.|||.||||||.||.|..
 Frog   250 ENMLMKYAKVEPDGTYVKPLSDKLTYGTMVFIRSMIVGDSARSLSRACTIAIRYSAVRHQSEIRA 314

  Fly   328 NQPEPQIMDHTTQQLKLFPQIAKAIVFKTTGDGIWNMYNVISGEIEQGNLDRLPEMHALSCCLKA 392
            .:|||||:|..|||.||||.:|.|..|:..|..:.:.|:.||.||:.|||:.|||:||||..|||
 Frog   315 GEPEPQILDFQTQQYKLFPLLATAYAFQFVGSYMSHTYHRISAEIQAGNLNELPELHALSAGLKA 379

  Fly   393 ICSADAAAGVETCRLSCGGHGYMDCSNFPTIYGMTTAVCTYEGENTVMLLQTARYLVKVYGQALN 457
            ..:..|..|:|.||::||||||..||..|.||...|..||||||||||:|||||:|||.|...|:
 Frog   380 FTTWAANTGIEECRMACGGHGYSRCSGIPDIYVTFTPACTYEGENTVMMLQTARFLVKSYKAVLS 444

  Fly   458 GEKLVPTVSYISDAINQTKFVNFDGSLRSIVKAF----QFVAANKTRIAY------EQIELRRKQ 512
            |::|...|||::| ::|.:......:.||:||..    ..|.|.|.|.|:      :.:....|:
 Frog   445 GKRLDGMVSYLND-VSQHRVQPHPVAGRSLVKDINDIQNLVEAYKQRAAWLVVAAAKNVNTDSKR 508

  Fly   513 GYGTEVAANLCGTFLTAAADLHGRAFLAQTAYTELLALSREVSPELAEVLKVVLELYLVDACL-- 575
            |...|.|.|.....|..|::.|     ......:|.|      .:|:|||.|.....|...||  
 Frog   509 GKRKEDAWNKNSVDLVRASEAH-----CHYVVVKLFA------DKLSEVLDVAAHRILSSLCLFY 562

  Fly   576 ------NRIGDFLRFIDLTDQDVTKLEVRLENCLKRFRPNAVSLVDSFDLHDRVLDSALGAYDGN 634
                  ...||||:...||...|..::.|:::.|...|||||:|||:||..|..|.|.||.||||
 Frog   563 ALHGISKNTGDFLQAGLLTTLQVDLVQQRVKDLLAVIRPNAVALVDAFDYSDTQLGSVLGRYDGN 627

  Fly   635 VYEHIFESTKKNPLNKEPVNGAFHKYLKP 663
            |||::||..||:||||..|:.:|||||||
 Frog   628 VYENMFEWAKKSPLNKTQVHESFHKYLKP 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5009NP_611264.2 AXO 8..645 CDD:173839 298/657 (45%)
PLN02443 10..669 CDD:178062 310/675 (46%)
acox1NP_001015762.1 AXO 3..638 CDD:173839 298/657 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 236 1.000 Domainoid score I2291
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38299
Inparanoid 1 1.050 543 1.000 Inparanoid score I1148
OMA 1 1.010 - - QHG54939
OrthoDB 1 1.010 - - D203634at33208
OrthoFinder 1 1.000 - - FOG0001030
OrthoInspector 1 1.000 - - mtm9371
Panther 1 1.100 - - LDO PTHR10909
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2020
SonicParanoid 1 1.000 - - X618
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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