DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5009 and acox1

DIOPT Version :9

Sequence 1:NP_611264.2 Gene:CG5009 / 37028 FlyBaseID:FBgn0027572 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001005933.1 Gene:acox1 / 449662 ZFINID:ZDB-GENE-041010-219 Length:660 Species:Danio rerio


Alignment Length:669 Identity:297/669 - (44%)
Similarity:419/669 - (62%) Gaps:25/669 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VNPDLQKERSTATFNPREFSVLWAGGEERFKEKKALEKLFLEDPALQDDLPISYLSHKELYEHSL 70
            :|||:.:||..|:||....:.:..||.|:...::.:|.|.:.||..|.: .:::||..|.|:.::
Zfish     1 MNPDISRERENASFNLEILTNVLDGGAEKTNRRREIESLVIGDPDFQHE-DLNFLSRSERYDAAV 64

  Fly    71 RKACIIGEKIRKLRADGEDGVDTYNALLGGSLGSAILKEGNPLALHYVMFVPTIMGQGTMDQQVE 135
            ||:..:..|:|:......:.:.:|..::.|     :.:|  ||.:|.|||:||:..|.|.:|:.:
Zfish    65 RKSAQMILKLREYGISDPEEIYSYKTVVRG-----VFQE--PLGVHNVMFIPTLKSQCTAEQRKK 122

  Fly   136 WLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVINTPSLSAYKWWPGGLGHTANHA 200
            |:..|....::||||||||||||.:|.|||.|.||.||||||:|:.::|:.||||||||.|:|||
Zfish   123 WIPLAESFHMLGTYAQTELGHGTHIRALETTATYDPSTQEFVLNSSTISSIKWWPGGLGKTSNHA 187

  Fly   201 VVVAQLYTKGEFRGLAPFIVQLRDSDTHRPMPGIDIGDIGTKLGMKGVNNGYLGLKNVRVPLNNM 265
            :|:|||||:|:..||..||..:|...||.|:||:.:||||.|.|...|:||||.|:|||:|..||
Zfish   188 IVLAQLYTQGKCHGLHAFITPIRCMKTHMPLPGVVVGDIGPKFGFDEVDNGYLKLENVRIPRENM 252

  Fly   266 LMKNQQVLPDGTYVAPKNSVLTYGTMMFVRCALIRDTAQSLAKASTIATRYSAVRRQSPIDPNQP 330
            |||..||.||||||.|.:..||||||:|:|..::.::|::|:|:.|||.||||||.||.:.|.:|
Zfish   253 LMKYAQVEPDGTYVKPPSDKLTYGTMVFIRSMIVGESARALSKSCTIAIRYSAVRHQSELRPGEP 317

  Fly   331 EPQIMDHTTQQLKLFPQIAKAIVFKTTGDGIWNMYNVISGEIEQGNLDRLPEMHALSCCLKAICS 395
            ||||:|:.|||.||||.:|.|..|...|..:...|:.|||:|..|:...|||:||||..|||..:
Zfish   318 EPQILDYQTQQYKLFPLLATAYAFHFVGQYMNKTYHRISGDISLGDFSELPELHALSAGLKAFTT 382

  Fly   396 ADAAAGVETCRLSCGGHGYMDCSNFPTIYGMTTAVCTYEGENTVMLLQTARYLVKVYGQALNGEK 460
            ..|..|:|.||:|||||||..||:.|.||...|..||||||||||:|||||||||.|.||..|::
Zfish   383 WAANTGIEVCRMSCGGHGYSRCSSLPDIYVTFTPTCTYEGENTVMMLQTARYLVKSYKQARAGQQ 447

  Fly   461 LVPTVSYISDAINQTK---------FVNFDGSLRSIVKAFQFVAANKTRIAYEQIELRRKQGYGT 516
            |...|||::::.::.:         .||.: .|.|:|:|::|.||....:|.:.::|..:.....
Zfish   448 LTGIVSYLNESQSRIQPHSVSSRPTVVNIN-DLVSLVEAYKFRAAKLVEVAAKNLQLELQHSKSN 511

  Fly   517 EVAANLCGTFLTAAADLHGRAFLAQTAYTELLA--LSREVSPELAEVLKVVLELYLVDACLNRIG 579
            |.|.|.....|..|:|.|     ......:|.|  ||......:..||..:..||.:.......|
Zfish   512 EDAWNNTSIDLVRASDAH-----CHYVVVKLFAAKLSEIGDKAVHSVLSTLALLYALHGVAQNSG 571

  Fly   580 DFLRFIDLTDQDVTKLEVRLENCLKRFRPNAVSLVDSFDLHDRVLDSALGAYDGNVYEHIFESTK 644
            |||:...|:...:.::..||:..|...|||||:|||:||..|.:|:|:||.||||||||:||..|
Zfish   572 DFLKAGLLSVSQLDQISQRLKGLLLEIRPNAVALVDAFDYRDEMLNSSLGRYDGNVYEHMFEWAK 636

  Fly   645 KNPLNKEPVNGAFHKYLKP 663
            |:|||...|:.:.:|||||
Zfish   637 KSPLNHTEVHESHNKYLKP 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5009NP_611264.2 AXO 8..645 CDD:173839 285/647 (44%)
PLN02443 10..669 CDD:178062 294/665 (44%)
acox1NP_001005933.1 AXO 3..637 CDD:173839 285/647 (44%)
PLN02443 5..656 CDD:178062 294/665 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 237 1.000 Domainoid score I2256
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38299
Inparanoid 1 1.050 549 1.000 Inparanoid score I1109
OMA 1 1.010 - - QHG54939
OrthoDB 1 1.010 - - D203634at33208
OrthoFinder 1 1.000 - - FOG0001030
OrthoInspector 1 1.000 - - otm26631
orthoMCL 1 0.900 - - OOG6_100457
Panther 1 1.100 - - LDO PTHR10909
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2020
SonicParanoid 1 1.000 - - X618
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

Return to query results.
Submit another query.