DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5009 and acox3

DIOPT Version :9

Sequence 1:NP_611264.2 Gene:CG5009 / 37028 FlyBaseID:FBgn0027572 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_998312.1 Gene:acox3 / 406421 ZFINID:ZDB-GENE-040426-2163 Length:692 Species:Danio rerio


Alignment Length:729 Identity:213/729 - (29%)
Similarity:328/729 - (44%) Gaps:109/729 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAKPVNPDLQKERSTATFNPREFSVLWAGGE-ERFKEK--KALEK--LFLEDPALQDDLPI--- 57
            :|..|..| |...|..|:|:.::......|.| ..||:.  :.||.  ||...|.  :|:|:   
Zfish     5 IPDFPNGP-LDIYRKKASFSWKDMMRFLEGDELIAFKQHVFRTLESDPLFARQPG--EDVPVEQK 66

  Fly    58 ---SYLSHKELYEHSLRKACIIGEKIRKLRADGEDGVDTYNALLG--------------GSLGSA 105
               ::|..|:|:::..    |..|::.:    ....:...|..||              |..|:.
Zfish    67 RELTFLRCKQLFKYDF----ITREELMQ----NPWKMTVLNDCLGMYDWSLCAKYFLNKGMFGAT 123

  Fly   106 ILKEGNPLALHYVMFVPTIMGQGTMDQQVEWLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYD 170
            ::..|:...|.:|..:..:|                   ..|.::.|||.||:..|.|.|.|.||
Zfish   124 VVNTGSQRHLKFVKDIERMM-------------------TFGCFSLTELSHGSNTRALRTTAKYD 169

  Fly   171 ASTQEFVINTPSLSAYKWWPGGLGHTANHAVVVAQLYT-KGEFRGLAPFIVQLRDSDTHRPMPGI 234
            .:|||||||:|...|.|:|.|.||.||.|:||.||||| .|:..||..||||:||..|...|||:
Zfish   170 PNTQEFVINSPDFEAAKFWVGNLGKTATHSVVFAQLYTPDGKCHGLHSFIVQVRDPKTLLAMPGV 234

  Fly   235 DIGDIGTKLGMKGVNNGYLGLKNVRVPLNNMLMKNQQVLPDGTYVAP-----KNSVLTYGTMMFV 294
            .:||:|.|||..|::||:....|||:|..|:|.|...|.|||.||:|     |....:.|.:...
Zfish   235 MVGDMGKKLGQNGLDNGFAVFHNVRIPRENLLNKTGDVAPDGQYVSPFKDPNKRFGASLGALSGG 299

  Fly   295 RCALIRDTAQSLAKASTIATRYSAVRRQSPIDPNQPEP-QIMDHTTQQLKLFPQIAKAIVFK-TT 357
            |..:.|....:|..|.|:|.|:||.|||  ..|.:.|. .::::..||.:|.|.:|.....: .|
Zfish   300 RVGITRMALVNLKLAVTVAVRFSATRRQ--FGPKEDEEIPVLEYQLQQWRLIPFLAAVYALEHFT 362

  Fly   358 GDGIWNMYNVISGEIEQGNLDRLPEM----HALSCCLKAICSADAAAGVETCRLSCGGHGYMDCS 418
            .....|......|.:.:...||..|:    |||||..|.:.|..|..|::.||.:||||||:..:
Zfish   363 KSFSMNFVEFQMGLLMKDKSDRQAELGREIHALSCASKPLGSWTAQRGIQECREACGGHGYLAMN 427

  Fly   419 NFPTIYGMTTAVCTYEGENTVMLLQTARYLVKVYGQALNG----EKLVPTVSYISD--AINQTKF 477
            ....:.......|||||:|.|:|.||:.||:........|    |..:.||:::.|  :|.|:||
Zfish   428 RLGDMRDDNDPNCTYEGDNNVLLQQTSNYLLSWIQHKQEGKGRIESPLETVNFLDDMSSILQSKF 492

  Fly   478 VNFDGSLRSIVKAFQFVAANKTRIAYEQIELRRK------QGYGTEVAANLCGTFLTAAADLHGR 536
            .  .||:...:.:...:||.|..:.:...|.::|      .|.|...|.|....:...:..:   
Zfish   493 T--VGSVEECMNSAVPLAAYKWLVCFLLGESQKKLFEEKSSGLGDFEARNNSQVYYCRSLAI--- 552

  Fly   537 AFLAQTAYTEL--LALSREVSPELAEVLKVVLELYLVDACLNRI-----GDFLRFIDLTDQDVTK 594
            ||:..|.....  |....:....|..||..:..||.:....|.:     |.:..    ..|.|..
Zfish   553 AFIEHTVLQRFHDLIQDEQTPAVLRSVLGRLCALYGLWTLTNHMAILYQGGYFS----GGQPVDF 613

  Fly   595 LEVRLENCLKRFRPNAVSLVDSFDLHDRVLDSALGAYDGNVYEHIFESTK--KNPLNK------- 650
            ::..:.....:.:.:||:|||.|...|.:|:|.:|..||.:|::::.:..  ||.|.:       
Zfish   614 IQTAILTLCGQLKDDAVALVDVFAPPDFILNSPIGKSDGELYKNLWSTVMQGKNVLERPSWWAEF 678

  Fly   651 ---EPVNGAFHKYL 661
               :||.|:....|
Zfish   679 CSDKPVVGSLRAKL 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5009NP_611264.2 AXO 8..645 CDD:173839 204/694 (29%)
PLN02443 10..669 CDD:178062 210/720 (29%)
acox3NP_998312.1 AXO 11..664 CDD:173839 204/693 (29%)
PLN02312 19..662 CDD:215178 201/682 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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