DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5009 and Mcad

DIOPT Version :9

Sequence 1:NP_611264.2 Gene:CG5009 / 37028 FlyBaseID:FBgn0027572 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster


Alignment Length:452 Identity:102/452 - (22%)
Similarity:170/452 - (37%) Gaps:119/452 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 QDDLPISYLSHK----EL------YEHS-------LRKACIIGEKIRKLRAD-GEDGVDTYNALL 98
            :|.|.:..|:.|    |:      |:.|       ::||..:|.....:.|| |...:|.:...|
  Fly    39 EDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTTCL 103

  Fly    99 G------GSLGSAILKEGNPLALHYVMFVPTIMGQGTMDQQVEWLSKAWDCEIIGTYAQTELGHG 157
            .      |..|.....|.:.|..     .|.|: .|..:|:.::|.:..:..::..|..||.|.|
  Fly   104 SAEELAYGCTGIMTALEASGLGQ-----TPVIL-SGNKEQKKKYLGRLLEEPLVAAYCVTEPGAG 162

  Fly   158 TFLRGLETRADYDASTQEFVINTPSLSAYKWW--PGGLGHTANHAVVVAQLYTKGE------FRG 214
            :.:.|::|||  :....|:|||     ..|.|  .||:   ||...|:|:.....:      |.|
  Fly   163 SDVSGIKTRA--EKKGDEWVIN-----GQKMWITNGGV---ANWYFVLARTNPDPKCPPSKAFTG 217

  Fly   215 LAPFIVQLRDSDTHRPMPGIDIGDIGTKLGMKGVNNGYLGLKNVRVPLNNMLMKNQQ--VLPDGT 277
               |||: |||      ||:..|.....:|.:..:...:..::||||..|:|:....  .:..||
  Fly   218 ---FIVE-RDS------PGLTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGT 272

  Fly   278 YVAPKNSVLTYGTMMFVRCALIRDTAQSLAKASTIATRYSAVRRQSPIDPNQPEPQIMDHTTQQL 342
            :...:..|......:..||.             ..|.:|:..|:...:       .|..|...|.
  Fly   273 FDKTRPPVAAGAVGLAQRCL-------------DEALKYALERKTFGV-------PIAYHQAVQF 317

  Fly   343 KLFPQIAKAIVFKTTGDGIWNMYNVISGEIEQGNLD----RLPEMHALSCCLKAICSADAAAGVE 403
            .|    |...:...|....|.:   .:.||:||..:    .:.:.||          ||.|..:.
  Fly   318 ML----ADMAIGVETSRLAWRL---SAWEIDQGRRNSYYASIAKCHA----------ADMANKIA 365

  Fly   404 TCRLSC-GGHGYMDCSNFPT--------IYGMTTAVCTYEGENTVMLLQTARYLVK-VYGQA 455
            :..:.. ||:|:.  |.:|.        ||.:      |||.:.:..|..:|.:.: ..|||
  Fly   366 SDAVQIFGGNGFN--SEYPVEKLMRDAKIYQI------YEGTSQIQRLIISRNMYEAAKGQA 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5009NP_611264.2 AXO 8..645 CDD:173839 102/452 (23%)
PLN02443 10..669 CDD:178062 102/452 (23%)
McadNP_648149.1 CaiA 35..411 CDD:224871 99/442 (22%)
MCAD 37..414 CDD:173846 99/445 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460791
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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