DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5009 and Acoxl

DIOPT Version :9

Sequence 1:NP_611264.2 Gene:CG5009 / 37028 FlyBaseID:FBgn0027572 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_017447070.1 Gene:Acoxl / 296138 RGDID:1306814 Length:656 Species:Rattus norvegicus


Alignment Length:543 Identity:147/543 - (27%)
Similarity:242/543 - (44%) Gaps:75/543 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 YVMFVPTIMGQGTMDQQVEWLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVINTP 181
            :::|...:...|:.:..::|.....:.:..|.:|.||.|||:.:||::|.|.:|..:|||||:.|
  Rat   108 FLLFGGAVNNLGSPEHVIKWFRPLKEQKYTGMFAMTEKGHGSNIRGIQTEATFDCDSQEFVIDMP 172

  Fly   182 SLSAYKWWPGGLGHTANHAVVVAQLYTKGEFRGLAPFIVQLRDSDTHRPMPGIDIGDIGTKLGMK 246
            ..:|.|.:.|...| .|:|.|.|||..:|:.:|...|||.:||.:.:. .||:...|:..|.|:.
  Rat   173 CENAQKMYIGNAMH-GNYAAVFAQLIIEGKSQGPHCFIVPIRDENGNL-YPGVTAIDMMYKEGLN 235

  Fly   247 GVNNGYLGLKNVRVPLNNMLMKNQQVLPDGTYVAP-KNSVLTYGTMMFV----RCALIRDTAQSL 306
            ||:||.|....||:|..|||.|...|.|||.|.:| ::....:..|:.:    |.|:......::
  Rat   236 GVDNGILIFDKVRIPRENMLDKLGSVTPDGQYHSPIQSKSARFNAMLAILTPSRLAVTFQAMGAM 300

  Fly   307 AKASTIATRYSAVRRQ-SPIDPNQPEPQIMDHTTQQLKLFPQIAKAIVFKTTGDGIWNMYNVISG 370
            .....||.|||..||| .|  ..:.|.:|::|..|.|:|...:|.|:....|..   :..:::..
  Rat   301 KLGLMIAIRYSHSRRQFGP--KGKEEVKIIEHQMQALRLMSHLATALALTFTSR---HAGHILDE 360

  Fly   371 EIEQG-NLDRLPEMHALSCCLKAICSADAAAGVETCRLSCGGHGYMDCSNFPTIYGMTTAVCTYE 434
            :|.|| .|.....:.||...|||..:.:....::.||...||.|||..:....:...|....|:|
  Rat   361 DILQGRELINRRSLQALMAGLKAYSTWETVRCLQDCRECTGGMGYMMENRLSGLKCDTDVFVTFE 425

  Fly   435 GENTVMLLQTARYLVKVYGQALNGEKLVPTVSYISD----AIN--QTKFVNFD----GSLRSIVK 489
            |:|.|||...||.|:..|.:.   .|..|.:..|.:    |::  :|.|:.|:    |.|..::|
  Rat   426 GDNVVMLQVVARELLAQYSKQ---HKKNPFLGMIQNWTETAMDKLRTSFLVFNTDTVGHLAFLLK 487

  Fly   490 AFQFVAANKTRIAYEQIELRRKQGYGTEVAANLCGTFLTAAADLHGRAFLAQTAYTELLALSREV 554
            |..|    :.|:....:..|......||                .|..|.|..:     .:...:
  Rat   488 AVNF----RERVLQRSLVSRIYYKVVTE----------------KGDFFRAWNS-----CMHHVI 527

  Fly   555 SPELAEVLKVVLELY--LVDACLNR---------------------IGDFLRFIDLTDQDVTKLE 596
            |..||.|.:|.||.:  .|..|.||                     .|.:|....||.....::.
  Rat   528 SLSLAHVHRVALEQFTLAVRQCPNREDQALLMKFCLLYGTKLLFQERGWYLEHKYLTPAASMRIR 592

  Fly   597 VRLENCLKRFRPNAVSLVDSFDL 619
            .:|.|..:..:.:::.::.:|::
  Rat   593 AQLLNLCESVKDDSLKVISAFNI 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5009NP_611264.2 AXO 8..645 CDD:173839 147/543 (27%)
PLN02443 10..669 CDD:178062 147/543 (27%)
AcoxlXP_017447070.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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