DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5009 and Acox2

DIOPT Version :9

Sequence 1:NP_611264.2 Gene:CG5009 / 37028 FlyBaseID:FBgn0027572 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_665713.2 Gene:Acox2 / 252898 RGDID:628684 Length:681 Species:Rattus norvegicus


Alignment Length:689 Identity:246/689 - (35%)
Similarity:360/689 - (52%) Gaps:61/689 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VNPDLQKERSTATFNPREFSVLWAGGEERFKEKKALEKLFLEDPALQDDLPISYLSHKELYEHSL 70
            |:||:..||.:.:|:....:.:..||......::.:|.:...||.. :...:.:::.:||||.::
  Rat    18 VHPDIDSERHSPSFSVERLTNILDGGLPNTVLRRKVESIIQSDPVF-NLKKLYFMTREELYEDAI 81

  Fly    71 RKACIIGEKIRKLRADGEDGVDTY--NALLGGSLGSAILKEGNPLALHYVMFVPTIMGQGTMDQQ 133
            :|...: ||:.......|||.:..  |.:|.|::.         |:||.|. :..|...|:.:|.
  Rat    82 QKRFHL-EKLAWSLGWSEDGPERIYANRVLDGNVN---------LSLHGVA-MNAIRSLGSDEQI 135

  Fly   134 VEWLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVINTPSLSAYKWWPGGLGHTAN 198
            .:|.....:.:||.|||||||||||:|:||||.|.||.:.|||||::|::::.|||||.||.:..
  Rat   136 AKWGQLCKNFQIITTYAQTELGHGTYLQGLETEATYDEARQEFVIHSPTMTSTKWWPGDLGWSVT 200

  Fly   199 HAVVVAQLYTKGEFRGLAPFIVQLRDSDTHRPMPGIDIGDIGTKLGMKGVNNGYLGLKNVRVPLN 263
            ||||:|||...|...|:..|||.:|..:.|.|:|||.:||||.|:|::.::||:|.|.:||||..
  Rat   201 HAVVLAQLTCLGVRHGMHAFIVPIRSLEDHTPLPGITVGDIGPKMGLEHIDNGFLQLNHVRVPRE 265

  Fly   264 NMLMKNQQVLPDGTYVAPKNSVLTYGTMMFVRCALI-RDTAQSLAKASTIATRYSAVRRQSPIDP 327
            |||.:..:|||||||.........|..|:..|..|: :....||.||..||||||.:|.||.:.|
  Rat   266 NMLSRFAEVLPDGTYQRLGTPQSNYLGMLVTRVQLLCKGILPSLQKACIIATRYSVIRHQSRLRP 330

  Fly   328 NQPEPQIMDHTTQQLKLFPQIAKAIVFKTTGDGIWNMYNVISGEIEQGNLDRLPEMHALSCCLKA 392
            :.||.:|:::.|||.||.||:|.:..|..|...:...::.....|.:.:...|||:||||..:||
  Rat   331 SDPEAKILEYQTQQQKLLPQLAVSYAFHFTATSLSEFFHSSYSAILKRDFSLLPELHALSTGMKA 395

  Fly   393 ICSADAAAGVETCRLSCGGHGYMDCSNFPTIYGMTTAVCTYEGENTVMLLQTARYLVKVYGQA-- 455
            ..:...|.|.|.||.:||||||...|..||:....||.|||||||||:.||.||:|:|.|.||  
  Rat   396 TFADFCAQGAEICRRACGGHGYSKLSGLPTLVARATASCTYEGENTVLYLQVARFLMKSYLQAQA 460

  Fly   456 ---LNGEKLVP-TVSYISD-----AINQTKFVNFDGSLRSIVKAFQFVAANKTRIAYEQIELRRK 511
               ...:|.:| :|.||:.     ...||            ...|:......|..||....|.|.
  Rat   461 SPGATPQKPLPQSVMYIATQRPARCSAQT------------AADFRCPDVYTTAWAYVSTRLIRD 513

  Fly   512 QGYGTEVAANLCGTFLTAAADLHGR-------AFLAQTAYTELLALSR--------EVSPELAEV 561
            ..:.|:       |.:.:..|.|..       ...|..||...:.:..        :..||:..|
  Rat   514 AAHRTQ-------TLMKSGVDQHDAWNQTTVIHLQAAKAYCYFITVKNFKEAVEKLDKEPEIQRV 571

  Fly   562 LKVVLELYLVDACLNRIGDFLRFIDLTDQDVTKLEVRLENCLKRFRPNAVSLVDSFDLHDRVLDS 626
            |:.:.:||.:...|...||||....|:...|........:.|...|.:|:.|.|:||..|..|:|
  Rat   572 LQRLCDLYALHGVLTNSGDFLHDGFLSGAQVDMAREAFLDLLPLIRKDAILLTDAFDFSDHCLNS 636

  Fly   627 ALGAYDGNVYEHIFESTKKNPLNKEPVNGAFHKYLKPFM 665
            |||.|||:|||.:||..:|:|.|.:. |.|:.||::|.|
  Rat   637 ALGCYDGHVYERLFEWAQKSPANTQE-NPAYKKYIRPLM 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5009NP_611264.2 AXO 8..645 CDD:173839 236/665 (35%)
PLN02443 10..669 CDD:178062 243/685 (35%)
Acox2NP_665713.2 AXO 20..655 CDD:173839 236/665 (35%)
Microbody targeting signal. /evidence=ECO:0000255 679..681
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348955
Domainoid 1 1.000 108 1.000 Domainoid score I6284
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54939
OrthoDB 1 1.010 - - D203634at33208
OrthoFinder 1 1.000 - - FOG0001030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100457
Panther 1 1.100 - - O PTHR10909
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X618
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.760

Return to query results.
Submit another query.