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Protein Alignment CG5009 and Acadl

DIOPT Version :9

Sequence 1:	NP_611264.2	Gene:	CG5009 / 37028	FlyBaseID:	FBgn0027572	Length:	669	Species:	Drosophila melanogaster
Sequence 2:	NP_036951.1	Gene:	Acadl / 25287	RGDID:	2011	Length:	430	Species:	Rattus norvegicus

Alignment Length:	494	Identity:	112/494 - (22%)
Similarity:	178/494 - (36%)	Gaps:	143/494 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 TATFNPREFSVLWAGGEERFKEKKALEKLFLEDPALQ--DDLPIS--YLSHKELYEHSLRKAC-- 74
            :||..|.......:|.|.|           ||.|:.:  .|:.|.  :.|..:::..|:||..
  Rat    17 SATLPPPSARCSHSGAEAR-----------LETPSAKKLTDIGIRRIFSSEHDIFRESVRKFFQE 70

  Fly    75 -II---------GEKIRKL-RADGEDGV------DTYNALLGGSLGSAILKE--------GNPLA 114
             :|         ||..|:| ...|:.|:      :.:..:.|..|.:|:..|        |...:
  Rat    71 EVIPYHEEWEKAGEVSRELWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQAYSNCTGPGFS 135

  Fly   115 LHYVMFVPTIMGQGTMDQQVEWLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVIN 179
            ||..:.:|.|...||.:|..:::.:....:.||..|.||.|.|:.|:|:.|.|....|  ::::|
  Rat   136 LHSDIVMPYIANYGTKEQIEQFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGS--DWILN 198

  Fly   180 TPSLSAYKWWPGGLGHTANHAVVVAQLYTKGEFR----GLAPFIVQLRDSDTHRPMPGIDIGDIG 240
            ...:.....|...|      .:|||  .|..|.|    |::.|:|:       ..|.|...|...
  Rat   199 GSKVFITNGWLSDL------VIVVA--VTNREARSPAHGISLFLVE-------NGMKGFIKGKKL 248

  Fly   241 TKLGMKGVNNGYLGLKNVRVPLNNMLMKNQQVLPDGTYV----APKNSVLTYGTMMFVRCALIRD 301
            .|:|||..:...|..::||:|.:.:|.:..:    |.|.    .|:..:            ||.|
  Rat   249 HKMGMKAQDTAELFFEDVRLPASALLGEENK----GFYYLMQELPQERL------------LIAD 297

  Fly   302 TAQSLAKASTIATRYSAVRRQSPIDPNQPEPQIMDHTTQQLKLFPQIAKAIVFKTTGDGIWNMYN 366
            .|.|..:.....|| :.||::..........|.:.|...:||....:.:|.|
  Rat   298 LAISACEFMFEETR-NYVRQRKAFGKTVAHIQTVQHKLAELKTNICVTRAFV------------- 348

  Fly   367 VISGEIEQGNLDRLPEMHALSCCLKAICSADAAAG-------VETCRLSC----GGHGYM----- 415
                       |...::|.    .|.:.||.|:..       ..|....|    ||.|||
  Rat   349 -----------DSCLQLHE----TKRLDSASASMAKYWASELQNTVAYQCVQLHGGWGYMWEYPI 398

  Fly   416 -----DCSNFPTIYGMTTAVCTYEGENTVMLLQTARYLV 449
                 |....| |||         |.|.:|....||.:|
  Rat   399 AKAYVDARVQP-IYG---------GTNEIMKELIARQIV 427

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.