DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5009 and acox-1.3

DIOPT Version :9

Sequence 1:NP_611264.2 Gene:CG5009 / 37028 FlyBaseID:FBgn0027572 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_493263.1 Gene:acox-1.3 / 184167 WormBaseID:WBGene00008566 Length:660 Species:Caenorhabditis elegans


Alignment Length:674 Identity:269/674 - (39%)
Similarity:384/674 - (56%) Gaps:33/674 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NPDLQKERSTATFNPREFSVLWAGGEERFKEKKALEKLFLEDPALQDDLPISYLSHKELYEHSLR 71
            |.||.:||..|||:..:.:.:..|.||....::.|.:.......|.:..|:.:::.:|....|.|
 Worm     9 NSDLTEERKNATFDTDKMAAVIYGREEIASRRRQLTESISRIHELAESKPLVFMTREEKIAESCR 73

  Fly    72 KACIIGEKIRKL---RADGEDGVDTYNALLGGSLGSAILKEGNPLALHYVMFVPTIMGQGTMDQQ 133
            |..::.....:.   |.:.||.:..|..:||        .||:|||||..||:||::.|.:.:||
 Worm    74 KLEVLSRHWNQTPFNRDNEEDALHIYREVLG--------MEGHPLALHDTMFIPTLVAQASQEQQ 130

  Fly   134 VEWLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVINTPSLSAYKWWPGGLGHTAN 198
            .:||.:|...||||.|||||:||||.||.|||.|.|...||||::|||:::|.|||||.||.::|
 Worm   131 EKWLGRARRKEIIGCYAQTEMGHGTNLRKLETTATYSPDTQEFILNTPTITALKWWPGALGKSSN 195

  Fly   199 HAVVVAQLYTKGEFRGLAPFIVQLRDSDTHRPMPGIDIGDIGTKLGMKGVNNGYLGLKNVRVPLN 263
            :|:|||.|..|.:..|..||:|||||..||.|:.||.:||||.|:...|.:|||||..|.|:|..
 Worm   196 NAIVVANLLIKDQNYGPHPFMVQLRDEKTHIPLKGIVVGDIGPKMAFNGADNGYLGFNNHRIPRT 260

  Fly   264 NMLMKNQQVLPDGTYVAPKNSVLTYGTMMFVRCALIRDTAQSLAKASTIATRYSAVRRQSPIDPN 328
            |:||::.:|..:|||:.|.::.:.|.:|:.||..:..|....||.|..||.||||||||..::..
 Worm   261 NLLMRHTKVEANGTYIKPSHAKIGYSSMVKVRSRMAMDQGLFLASALVIAVRYSAVRRQGFLEDK 325

  Fly   329 QPEPQIMDHTTQQLKLFPQIAKAIVFKTTGDGIWNMYNVISGEIEQGNLDRLPEMHALSCCLKAI 393
            ..:.:::|:.|||.:|||.:|:|..|..||....::|:.:..:::.||...:.::|||:..||::
 Worm   326 TQKVKVLDYQTQQHRLFPSLARAYAFIFTGFETIHLYSQLLKDVDMGNTSGMADLHALTSGLKSV 390

  Fly   394 CSADAAAGVETCRLSCGGHGYMDCSNFPTIYGMTTAVCTYEGENTVMLLQTARYLVKVYGQALNG 458
            .:.....|:|..|::||.|||...|....|||:....|||||||.|||||.||||||......:|
 Worm   391 VTHQTGEGIEQARMACGEHGYSMASYISEIYGVAIGGCTYEGENMVMLLQLARYLVKSVELIKSG 455

  Fly   459 E--KLVPTVSYISDAINQTKFVNFD-GSLRSIVKAFQFVAANKTRIAYEQIELRRKQGYGTEVAA 520
            |  ||.|.|||::     .|..:.| .||...|.||:.:|..:...|.|:.....:.|...|||.
 Worm   456 EEKKLGPMVSYLA-----AKGGHPDLSSLNGYVTAFEHMARRQAWKATEKFLKLMETGESREVAW 515

  Fly   521 NLCGTFLTAAADLHGRAFLAQTAYTELLALSREVSP----ELAEVLKVVLELYLVDACLNRIGDF 581
            |.....||.|:.||.|.|:.:       |..|.||.    .:.|||..:|.|::....|:.....
 Worm   516 NKSAVELTRASRLHTRLFIIE-------AFMRRVSRIEDIPVKEVLTDLLHLHVNYELLDVATYA 573

  Fly   582 LRFIDLTDQDVTKLEVRLENCLKRFRPNAVSLVDSFDLHDRVLDSALGAYDGNVYEHIFESTKKN 646
            |.|:..|..|..:.::.|  .|::.||:||||||||.:.|..|.|.||..||||||::|:..|.:
 Worm   574 LEFMSSTQLDYIRDQLYL--YLEKIRPSAVSLVDSFQISDMQLRSVLGRRDGNVYENLFKWAKSS 636

  Fly   647 PLNKEPVNGAFHKYLKPFM-KAHL 669
            ||||..|..:..|||||.| ||.|
 Worm   637 PLNKSDVLPSVDKYLKPMMEKAKL 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5009NP_611264.2 AXO 8..645 CDD:173839 253/646 (39%)
PLN02443 10..669 CDD:178062 266/669 (40%)
acox-1.3NP_493263.1 ACAD 11..634 CDD:299127 253/644 (39%)
PLN02443 12..657 CDD:178062 264/666 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163703
Domainoid 1 1.000 206 1.000 Domainoid score I1698
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38299
Inparanoid 1 1.050 482 1.000 Inparanoid score I803
Isobase 1 0.950 - 0 Normalized mean entropy S1686
OMA 1 1.010 - - QHG54939
OrthoDB 1 1.010 - - D203634at33208
OrthoFinder 1 1.000 - - FOG0001030
OrthoInspector 1 1.000 - - mtm4727
orthoMCL 1 0.900 - - OOG6_100457
Panther 1 1.100 - - O PTHR10909
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X618
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.720

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