DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5009 and acox-3

DIOPT Version :9

Sequence 1:NP_611264.2 Gene:CG5009 / 37028 FlyBaseID:FBgn0027572 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_500943.1 Gene:acox-3 / 177386 WormBaseID:WBGene00019060 Length:667 Species:Caenorhabditis elegans


Alignment Length:689 Identity:203/689 - (29%)
Similarity:327/689 - (47%) Gaps:88/689 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PDLQKERSTATFNPREFSVLWAGGEERFKEKKALEKLFLEDPALQDDLPISYLSHKELYEHSLRK 72
            |.:.|.|..|||:.::.... ..|||..:.|..:......:|....|..:  ||.:|..|     
 Worm     4 PLIDKYRKMATFDWKKLKAA-VEGEEHVRLKSEVVAKMKSEPVFHRDYRV--LSREEQRE----- 60

  Fly    73 ACIIGEKIRK-----LRADGEDGVDTYNALLGGSLGSAILKEGNPLALHYVMFVPTIMGQGTMDQ 132
              ::.::.:|     |..|....::.::||. .:|.:........|.||..:|...:...|| |:
 Worm    61 --VVHQRWKKIVEWGLFKDPYSDLENFHALT-ETLEAYDQGTSARLFLHGNVFGAAVKSMGT-DR 121

  Fly   133 QVEWLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVINTPSLSAYKWWPGGLGHTA 197
            ..:.:.|..:.||:|.:..||:|||:....::|.|.:|  ..|.|.||||:||.|.|.|.|.|:|
 Worm   122 HKDLIQKTENNEIVGAFCLTEVGHGSNTAEIQTTATFD--NGELVFNTPSVSAIKCWAGNLAHSA 184

  Fly   198 NHAVVVAQLYTKGEFRGLAPFIVQLRDSDTHRPMPGIDIGDIGTKLG-MKGVNNGYLGLKNVRVP 261
            .|.||.|||:.:|:..|...|::|:|...|.:.:|||.|||:|:|.| .:||.||::..||.|.|
 Worm   185 THVVVYAQLHVEGKNEGFHGFVIQVRCPRTFQTLPGITIGDMGSKPGCWQGVENGWMEFKNHRAP 249

  Fly   262 LNNMLMKNQQVLPDGTYV-----APKNSVLTYGTMMFVRCALIRDTAQSLAKASTIATRYSAVRR 321
            |:.:|.|...:.|||.||     |.:...::.||:...|..:|.....:...|||||.|||..||
 Worm   250 LSALLNKGCDITPDGKYVTSFKSASEKQSVSLGTLSVGRLGIIAKGMMACTFASTIAIRYSVARR 314

  Fly   322 Q-SPIDPNQPEPQIMDHTTQQLKLFPQIAKAI---VF--KTTGDGIWNMYNVISGEIEQGNLDRL 380
            | .|:...:.|..::::..||.:|||.::.||   :|  |..|.....|..||.||......:..
 Worm   315 QFGPVKGAENEIPVLEYPLQQYRLFPYLSAAICIRIFQKKFVGHFTEYMMRVIMGEKSDELSEFS 379

  Fly   381 PEMHALSCCLKAICSADAAAGVETCRLSCGGHGYMDCSNFPTIYGMTTAVCTYEGENTVMLLQTA 445
            .|:||||...|.:.:......:...|.:||||||:..|...|:........|:||||.::|.||:
 Worm   380 KEVHALSSGAKPVATWLGVESLGEARKACGGHGYLQMSRLNTLRDDNDPSQTFEGENFMILQQTS 444

  Fly   446 RYLVKVYGQALN-G--EKLVPTVSYISDAINQTKFVNFDGS-LRSIVKAFQFVAANKTRIAYEQI 506
            ..|:   |:|.: |  |..:.|:|:::.  ..:||.::..: :..::.|:::       :.|..:
 Worm   445 NILL---GKAQSIGSIETPMSTMSFLNQ--KPSKFSSWSSNPVNDVLSAYRY-------LTYHLL 497

  Fly   507 ELRRKQGYGTEVAANLCGTF-LTAAADLHGRAFLAQTAYTELLAL-----------SREVSPELA 559
            :....:.|..:.:..  .:| :.....:| ||.....||||...:           .:.|.|.|.
 Worm   498 QTTSAEAYRLKASGK--NSFEVRNEIQIH-RAVNLSVAYTEHTMIHWVQQFLKEIEDQSVKPVLQ 559

  Fly   560 EVLKVVLELYLVDACL-----------NRIGDFLRFIDLTDQDVTKLEVRLENCLKRFRPNAVSL 613
            :||. :..|:|::..|           .:.|:.||             .:|...:...:|.|::|
 Worm   560 KVLN-LFSLFLLERHLATLYITGYASGGKFGEDLR-------------EKLRLAVAELKPEAIAL 610

  Fly   614 VDSFDLHDRVLDSALGAYDGNVYEHIFESTKKNPLNKEP 652
            |||....|.:|.|||||.||..||||.|..:|. .|::|
 Worm   611 VDSIAPDDFILHSALGASDGKAYEHIMEEFRKY-TNEQP 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5009NP_611264.2 AXO 8..645 CDD:173839 200/680 (29%)
PLN02443 10..669 CDD:178062 202/687 (29%)
acox-3NP_500943.1 AXO 4..642 CDD:173839 200/680 (29%)
PLN02443 10..639 CDD:178062 197/671 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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