DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5009 and acdh-9

DIOPT Version :9

Sequence 1:NP_611264.2 Gene:CG5009 / 37028 FlyBaseID:FBgn0027572 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_493832.1 Gene:acdh-9 / 173466 WormBaseID:WBGene00017874 Length:409 Species:Caenorhabditis elegans


Alignment Length:337 Identity:72/337 - (21%)
Similarity:113/337 - (33%) Gaps:109/337 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 IGTYAQTELGHGTFLRGLETRA----DYDASTQEFVINTPSLSAYKWWPGGLGHTANHAVVVAQL 206
            :|:|..||...|:....:.|.|    ||      :|:|     ..|.:..|.|.:.|:.|::.| 
 Worm   141 LGSYCLTEPDAGSDAASIRTTATKKGDY------YVVN-----GSKAFISGAGTSNNYFVMMRQ- 193

  Fly   207 YTKGEFRGLAP-----FIVQLRDSDTHRPMPGIDIGDIGTKLGMKGVNNGYLGLKNVRVPLNNML 266
                  .|.||     |.:.:.|.     ..|...|....|||........|..::.:||:.|.:
 Worm   194 ------DGAAPGAKGIFCLMIEDG-----TEGFSYGKKEDKLGWNSQPTRILTFEDCKVPITNQI 247

  Fly   267 MKNQQVLPDGTYVAPKNSVLTYGTMMFVRCALIRDTAQSLAKASTIATRYSAVRRQSPIDPNQPE 331
            .|      ||.......:.|..|.:....|:|                  .|.:|.         
 Worm   248 GK------DGFGFNIAMAGLNGGRINIASCSL------------------GAAQRS--------- 279

  Fly   332 PQIMDHTTQQLKLFPQIAKAIVFKTTGDGIWNMYN-------------VISGEIEQGNLDRLPEM 383
               ||...:.||...|..|::     .|..:|.:.             ::....||.:.|. ||.
 Worm   280 ---MDLAIEHLKYRKQFGKSL-----ADFQYNQFKLAELATKLYTSRLIVRNAAEQLDNDD-PEK 335

  Fly   384 HALSCCLKAICSADAAAGVETCRLSC-GGHGYMDCSNFPTIYGMTTAVCTY----------EGEN 437
            .|| |.:..:.:.|....|....|.. ||:|::  .::|        |..|          ||.|
 Worm   336 VAL-CAMAKLHATDNCFDVVNGALQMFGGYGFL--KDYP--------VQQYLRDIRVHQILEGTN 389

  Fly   438 TVMLLQTARYLV 449
            .:|.|..:|.|:
 Worm   390 EMMRLLISRDLL 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5009NP_611264.2 AXO 8..645 CDD:173839 72/337 (21%)
PLN02443 10..669 CDD:178062 72/337 (21%)
acdh-9NP_493832.1 CaiA 26..401 CDD:224871 71/335 (21%)
IBD 27..403 CDD:173851 72/337 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.