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Protein Alignment CG5009 and Acadl

DIOPT Version :9

Sequence 1:	NP_611264.2	Gene:	CG5009 / 37028	FlyBaseID:	FBgn0027572	Length:	669	Species:	Drosophila melanogaster
Sequence 2:	NP_031407.2	Gene:	Acadl / 11363	MGIID:	87866	Length:	430	Species:	Mus musculus

Alignment Length:	478	Identity:	104/478 - (21%)
Similarity:	173/478 - (36%)	Gaps:	137/478 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    29 AGGEERFKEKKALEKLFLEDPALQ--DDLPIS--YLSHKELYEHSLRKAC---II---------G 77
            :|.|.|           ||.|:.:  .|:.|.  :.|..:::..|:||..   :|         |
Mouse    30 SGAEAR-----------LETPSAKKLTDIGIRRIFSSEHDIFRESVRKFFQEEVIPHHTEWEKAG 83

  Fly    78 EKIRKL-RADGEDGV------DTYNALLGGSLGSAILKE--------GNPLALHYVMFVPTIMGQ 127
            |..|:: ...|:.|:      :.:..:.|..|.:|:..|        |...:||..:.:|.|...
Mouse    84 EVSREVWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQAYSNCTGPGFSLHSDIVMPYIANY 148

  Fly   128 GTMDQQVEWLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVINTPSLSAYKWWPGG 192
            ||.:|..:::.:....:.||..|.||.|.|:.|:|:.|.|....|  ::::|...:.....|...
Mouse   149 GTKEQIEKFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGS--DWILNGSKVFITNGWLSD 211

  Fly   193 LGHTANHAVVVAQLYTKGEFR----GLAPFIVQLRDSDTHRPMPGIDIGDIGTKLGMKGVNNGYL 253
            |      .:|||  .|..|.|    |::.|:|:       ..|.|...|....|:|||..:...|
Mouse   212 L------VIVVA--VTNREARSPAHGISLFLVE-------NGMKGFIKGRKLHKMGMKAQDTAEL 261

  Fly   254 GLKNVRVPLNNMLMKNQQVLPDGTYV----APKNSVLTYGTMMFVRCALIRDTAQSLAKASTIAT 314
            ..::||:|.|.:|.:..:    |.|.    .|:..:            ||.:.|.|..:.....|
Mouse   262 FFEDVRLPANALLGEENK----GFYYLMQELPQERL------------LIAELAISACEFMFEET 310

  Fly   315 RYSAVRRQSPIDPNQPEPQIMDHTTQQLKLFPQIAKAIV--------FKTTGDGIWNMYNVISGE 371
            | :.|:::..........|.:.|...:||....:.:|.|        .|....|..:|....:.|
Mouse   311 R-NYVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRAFVDSCLQLHETKRLDSGSASMAKYWASE 374

  Fly   372 IEQGNLDRLPEMHALSCCLKAICSADAAAGVETCRLSCGGHGYM----------DCSNFPTIYGM 426
            ::........::|                         ||.|||          |....| |||
Mouse   375 LQNSVAYECVQLH-------------------------GGWGYMWEYPIAKAYVDARVQP-IYG- 412

  Fly   427 TTAVCTYEGENTVMLLQTARYLV 449
                    |.|.:|....||.:|
Mouse   413 --------GTNEIMKELIARQIV 427

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.