Protein Alignment HLH54F and Scx

DIOPT Version :9

• Sequence 1: NP_477302.1
• Gene: HLH54F / 37027
• FlyBaseID: FBgn0022740
• Length: 242
• Species: Drosophila melanogaster
• Sequence 2: NP_001123980.1
• Gene: Scx / 680712
• RGDID: 1588254
• Length: 209
• Species: Rattus norvegicus
• Alignment Length: 105
• Identity: 34/105 - (32%)
• Similarity: 46/105 - (43%)
• Gaps: 40/105 - (38%)

  Fly    19 DEDASSQSS----------------------------------------QPPVQRNAANARERMR 43
            |||..|:||                                        :.|.||:.||||||.|
  Rat    26 DEDRGSESSGSDEKPCRVHAARCGLQGARRRAGGRRAAGSGPGPGGRPGREPRQRHTANARERDR 90

  Fly    44 MRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATLYIKQL 83
            ...:::|:..|:|.:|..|.|.||||::|||||:.||..|
  Rat    91 TNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHL 130

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH54F	NP_477302.1	HLH	32..83	CDD:278439	26/50 (52%)
Scx	NP_001123980.1	bHLH_TS_scleraxis	76..143	CDD:381521	28/55 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166343484
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.830