DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HLH54F and mespaa

DIOPT Version :9

Sequence 1:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_571626.1 Gene:mespaa / 58069 ZFINID:ZDB-GENE-000406-8 Length:223 Species:Danio rerio


Alignment Length:104 Identity:35/104 - (33%)
Similarity:47/104 - (45%) Gaps:27/104 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSSPTEFFD-------------DDFDEDASSQSSQPP------------VQRNAANARERMRMRV 46
            |.|||...|             ..|.:.......|||            |:|..|:.||::|||.
Zfish    38 SLSPTSSIDSCSFSPPAYSLLPQIFPKSIQKTDVQPPKRTGRPKSKFPGVKRQTASEREKLRMRD 102

  Fly    47 LSSAYGRLKTKLP-NIPPDTK-LSKLDTLRLATLYIKQL 83
            |:.|...|:|.|| ::.|..| |:|::|||||..||..|
Zfish   103 LTKALHHLRTFLPASVAPVGKTLTKIETLRLAIQYISCL 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH54FNP_477302.1 HLH 32..83 CDD:278439 24/52 (46%)
mespaaNP_571626.1 HLH 88..141 CDD:278439 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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