DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH54F and tcf21

DIOPT Version :10

Sequence 1:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster
Sequence 2:XP_073794575.1 Gene:tcf21 / 558148 ZFINID:ZDB-GENE-051113-88 Length:210 Species:Danio rerio


Alignment Length:90 Identity:50/90 - (55%)
Similarity:58/90 - (64%) Gaps:10/90 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EDASSQSSQP--------PVQRNAANARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLA 76
            :.|:.:.|.|        .|||||||||||.||||||.|:.||||.||.:|||||||||||||||
Zfish    91 KSANMRRSAPNGVAQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLA 155

  Fly    77 TLYIKQL--ITAVETGSHSQNHPHN 99
            :.||..|  |.|.:...:...||.|
Zfish   156 SSYIAHLRQILANDKYGNGYIHPVN 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH54FNP_477302.1 bHLH_TS_musculin_like 32..87 CDD:381429 42/56 (75%)
tcf21XP_073794575.1 None

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