Protein Alignment HLH54F and msc

DIOPT Version :9

• Sequence 1: NP_477302.1
• Gene: HLH54F / 37027
• FlyBaseID: FBgn0022740
• Length: 242
• Species: Drosophila melanogaster
• Sequence 2: XP_684279.3
• Gene: msc / 556396
• -ID: -
• Length: 160
• Species: Danio rerio
• Alignment Length: 137
• Identity: 55/137 - (40%)
• Similarity: 74/137 - (54%)
• Gaps: 35/137 - (25%)

  Fly    15 DDDFDED--------------ASSQSSQPPV---------QRNAANARERMRMRVLSSAYGRLKT 56
            :|||..|              |:|.:::|.:         ||||||||||.||||||.|:.||||
Zfish    23 EDDFSLDDGLKPKPKSKTPRGAASNTNKPQMKLAKDGRQSQRNAANARERARMRVLSKAFSRLKT 87

  Fly    57 KLPNIPPDTKLSKLDTLRLATLYI---KQLITAVETGSHSQNHPHNHNQHHSLNHSHSSTTSSEG 118
            .||.:|.|||||||||||||:.||   :||:         |:..:::|..|..|.:.....|:..
Zfish    88 SLPWVPADTKLSKLDTLRLASSYISHLRQLL---------QDDTYHNNLAHPANLTWPFVVSARS 143

  Fly   119 LDTSHMA 125
            .||..::
Zfish   144 EDTKDIS 150

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH54F	NP_477302.1	HLH	32..83	CDD:278439	39/53 (74%)
msc	XP_684279.3	HLH	68..120	CDD:197674	36/60 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170583760
Domainoid	1	1.000	81	1.000	Domainoid score	I8465
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004410
OrthoInspector	1	1.000	-	-		otm25659
orthoMCL	1	0.900	-	-		OOG6_107588
Panther	1	1.100	-	-	LDO	PTHR23349
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R5029
SonicParanoid	1	1.000	-	-		X3129
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	8	7.960