DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH54F and tcf15

DIOPT Version :10

Sequence 1:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_001016506.1 Gene:tcf15 / 549260 XenbaseID:XB-GENE-488935 Length:183 Species:Xenopus tropicalis


Alignment Length:105 Identity:38/105 - (36%)
Similarity:51/105 - (48%) Gaps:17/105 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SSPTEFFDDDFDEDASSQSSQP---------------PV--QRNAANARERMRMRVLSSAYGRLK 55
            |...|...||.|:......|.|               ||  ||.|||||||.|.:.:::|:..|:
 Frog    22 SEDEENQSDDSDQSFGCYQSSPKRRKVGGTGGTGGGQPVVKQRQAANARERDRTQSVNTAFTALR 86

  Fly    56 TKLPNIPPDTKLSKLDTLRLATLYIKQLITAVETGSHSQN 95
            |.:|..|.|.||||::.||||:.||..|...:..|...|:
 Frog    87 TLIPTEPVDRKLSKIEILRLASSYISHLANVLLLGEGCQD 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH54FNP_477302.1 bHLH_TS_musculin_like 32..87 CDD:381429 27/54 (50%)
tcf15NP_001016506.1 bHLH_SF 60..121 CDD:469605 28/60 (47%)

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