Protein Alignment HLH54F and Atoh1

DIOPT Version :10

• Sequence 1: NP_477302.1
• Gene: HLH54F / 37027
• FlyBaseID: FBgn0022740
• Length: 242
• Species: Drosophila melanogaster
• Sequence 2: NP_001102708.1
• Gene: Atoh1 / 500156
• RGDID: 1565171
• Length: 351
• Species: Rattus norvegicus
• Alignment Length: 191
• Identity: 54/191 - (28%)
• Similarity: 81/191 - (42%)
• Gaps: 33/191 - (17%)

  Fly    32 QRNAANARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATLYIKQLITAVETGSHSQNH 96
            :|.|||||||.||..|:.|:.:|:..:|:...|.||||.:||::|.:||..|...::|.|..:..
  Rat   157 RRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELLQTPSVGEQP 221

  Fly    97 P----HNHNQHHSLNHSHSSTTSSEGLDTSHMADSS---GGGNYNFHNNGHGMSWPFEFHQSSRS 154
            |    ...|.||   |..::.:...|...|.:|.:.   |||             |......:..
  Rat   222 PPPAASCKNDHH---HLRAAASYEGGAGASAVAGAQPAPGGG-------------PRPTPPGACR 270

  Fly   155 LAFA-PSSSTTSSARMDWQTLHTQSYPKTTRGETHVSADLS-------YHQLPESHSHWYP 207
            ..|: |:||...|.::|  .||..::............|||       ...:||..|...|
  Rat   271 TRFSTPASSGGYSVQLD--ALHFPAFEDRALTAMMAQKDLSPSLPGGILQPVPEDSSKTSP 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH54F	NP_477302.1	bHLH_TS_musculin_like	32..87	CDD:381429	25/54 (46%)
Atoh1	NP_001102708.1	bHLH_TS_ATOH1	152..215	CDD:381556	25/57 (44%)