DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH54F and Fer3

DIOPT Version :10

Sequence 1:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster


Alignment Length:99 Identity:34/99 - (34%)
Similarity:55/99 - (55%) Gaps:8/99 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DASSQSSQPP-------VQRNAANARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATL 78
            :.||.||:..       .||.|||.|||.||..|:.|:.:|:.|:|....:.:||:::|||||..
  Fly    69 NGSSSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAIT 133

  Fly    79 YIKQLITAVETGSHSQNHPHNHNQHHSLNHSHSS 112
            || ..:..:.:|:.|.:|....:.:.|:|..|.:
  Fly   134 YI-GFMAELLSGTPSNSHKSRSDVYGSMNGHHQA 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH54FNP_477302.1 bHLH_TS_musculin_like 32..87 CDD:381429 24/54 (44%)
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 24/63 (38%)

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