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Protein Alignment HLH54F and twi
DIOPT Version :9
Sequence 1: | NP_477302.1 |
Gene: | HLH54F / 37027 |
FlyBaseID: | FBgn0022740 |
Length: | 242 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001033967.1 |
Gene: | twi / 37655 |
FlyBaseID: | FBgn0003900 |
Length: | 490 |
Species: | Drosophila melanogaster |
Alignment Length: | 118 |
Identity: | 41/118 - (34%) |
Similarity: | 57/118 - (48%) |
Gaps: | 30/118 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 PRK--KRSSSPTEFFDDDFDEDASSQSSQPPVQRNAANARERMRMRVLSSAYGRLKTKLPNIPPD 64
||: ||..|.|| :.||.:: ||..||.|||.|.:.|:.|:..|:..:|.:|.|
Fly 343 PRRRLKRKPSKTE----ETDEFSN--------QRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD 395
Fly 65 TKLSKLDTLRLATLYIK-----------QLITAVETGSHSQNHPHNHNQHHSL 106
||||:.||:|||.||. .|:.|:| :|..|..:....||
Fly 396 -KLSKIQTLKLATRYIDFLCRMLSSSDISLLKALE----AQGSPSAYGSASSL 443
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH54F | NP_477302.1 |
HLH |
32..83 |
CDD:278439 |
25/61 (41%) |
twi | NP_001033967.1 |
HLH |
363..413 |
CDD:278439 |
25/50 (50%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45452835 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR23349 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.940 |
|
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