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Protein Alignment HLH54F and ptf1a
DIOPT Version :9
Sequence 1: | NP_477302.1 |
Gene: | HLH54F / 37027 |
FlyBaseID: | FBgn0022740 |
Length: | 242 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_997524.1 |
Gene: | ptf1a / 368662 |
ZFINID: | ZDB-GENE-030616-579 |
Length: | 265 |
Species: | Danio rerio |
Alignment Length: | 152 |
Identity: | 46/152 - (30%) |
Similarity: | 69/152 - (45%) |
Gaps: | 24/152 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 RNAANARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATLYIKQLITAVETGSHSQNHP 97
|.|||.|||.||:.::.|:..|::.:|.:|.:.:|||:||||||..||..|...|::....:| |
Zfish 117 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELVQSDMPIRN-P 180
Fly 98 HNH--NQHHSLNHSHSSTTSSEGLDTSH----MADSSGGGNYNFHNNGHGMSWPFEFHQSSRSLA 156
|:. ||...:...|..|.|....|..: :| ||.:||..|.....:::.
Zfish 181 HSDALNQPKKVIICHRGTRSPSPNDPDYGLPPLA-------------GHSLSWTDEKQLKDQNII 232
Fly 157 FAPSSSTTSSARMDWQTLHTQS 178
......|....| .||.:|
Zfish 233 RTAKVWTPEDPR----KLHLKS 250
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH54F | NP_477302.1 |
HLH |
32..83 |
CDD:278439 |
24/49 (49%) |
ptf1a | NP_997524.1 |
HLH |
121..173 |
CDD:197674 |
23/51 (45%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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