DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH54F and Ascl5

DIOPT Version :10

Sequence 1:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_001385517.1 Gene:Ascl5 / 363991 RGDID:1561854 Length:188 Species:Rattus norvegicus


Alignment Length:87 Identity:29/87 - (33%)
Similarity:45/87 - (51%) Gaps:5/87 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATLYIK---QLITAVETGS--HSQNH 96
            |.|||.|::.::..|.||:..||....:.:|||::|||.|..|||   :|::|...|:  .:.:.
  Rat    86 NERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSAAPDGAPPTATSP 150

  Fly    97 PHNHNQHHSLNHSHSSTTSSEG 118
            |..|..|.:.....|....|.|
  Rat   151 PPAHAGHGNALQPPSLVAESSG 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH54FNP_477302.1 bHLH_TS_musculin_like 32..87 CDD:381429 21/52 (40%)
Ascl5NP_001385517.1 bHLH_TS_ASCL5 76..136 CDD:381590 20/49 (41%)

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