Protein Alignment HLH54F and Msc

DIOPT Version :10

• Sequence 1: NP_477302.1
• Gene: HLH54F / 37027
• FlyBaseID: FBgn0022740
• Length: 242
• Species: Drosophila melanogaster
• Sequence 2: XP_038965669.1
• Gene: Msc / 312897
• RGDID: 1305496
• Length: 220
• Species: Rattus norvegicus
• Alignment Length: 70
• Identity: 43/70 - (61%)
• Similarity: 51/70 - (72%)
• Gaps: 0/70 - (0%)

  Fly    32 QRNAANARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATLYIKQLITAVETGSHSQNH 96
            ||||||||||.||||||.|:.||||.||.:|||||||||||||||:.||..|...::...:..::
  Rat   105 QRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYEDSY 169

  Fly    97 PHNHN 101
            .|..|
  Rat   170 VHPVN 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH54F	NP_477302.1	bHLH_TS_musculin_like	32..87	CDD:381429	41/54 (76%)
Msc	XP_038965669.1	bHLH_TS_musculin	102..167	CDD:381546	41/61 (67%)