Protein Alignment HLH54F and Msc

DIOPT Version :9

• Sequence 1: NP_477302.1
• Gene: HLH54F / 37027
• FlyBaseID: FBgn0022740
• Length: 242
• Species: Drosophila melanogaster
• Sequence 2: XP_008761698.1
• Gene: Msc / 312897
• RGDID: 1305496
• Length: 220
• Species: Rattus norvegicus
• Alignment Length: 70
• Identity: 43/70 - (61%)
• Similarity: 51/70 - (72%)
• Gaps: 0/70 - (0%)

  Fly    32 QRNAANARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATLYIKQLITAVETGSHSQNH 96
            ||||||||||.||||||.|:.||||.||.:|||||||||||||||:.||..|...::...:..::
  Rat   105 QRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYEDSY 169

  Fly    97 PHNHN 101
            .|..|
  Rat   170 VHPVN 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH54F	NP_477302.1	HLH	32..83	CDD:278439	40/50 (80%)
Msc	XP_008761698.1	bHLH_TS_musculin	102..167	CDD:381546	41/61 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166343493
Domainoid	1	1.000	81	1.000	Domainoid score	I8315
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004410
OrthoInspector	1	1.000	-	-		otm45105
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR23349
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X3129
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.930