Protein Alignment HLH54F and Mesp1

DIOPT Version :9

• Sequence 1: NP_477302.1
• Gene: HLH54F / 37027
• FlyBaseID: FBgn0022740
• Length: 242
• Species: Drosophila melanogaster
• Sequence 2: NP_001101001.1
• Gene: Mesp1 / 308766
• RGDID: 1311751
• Length: 242
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 52/260 - (20%)
• Similarity: 88/260 - (33%)
• Gaps: 100/260 - (38%)

  Fly     2 PRKKRSSSPTEFFDDDF-------DEDASSQSSQPPV-------------------------QRN 34
            |.:.:.|.|::  .|.|       |....:|:|.|.:                         ||.
  Rat    17 PARPQPSMPSD--GDSFCSPAWSSDSWDGAQASSPALPCARPARRAGTPGRRGTHGSRLGSGQRQ 79

  Fly    35 AANARERMRMRVLSSAYGRLKTKLPN--IPPDTKLSKLDTLRLATLYIKQLITAVETGSHSQNHP 97
            :|:.||::|||.|:.|...|:..||.  .|....|:|::|||||..||..|...:.....|.
  Rat    80 SASEREKLRMRTLARALHELRRFLPPSVAPIGQNLTKIETLRLAIRYIGHLSAVLGLSEDSL--- 141

  Fly    98 HNHNQHHSLNHSHSSTTSSEGLDTSHMADSSGGGNYNFHNNGHGMSWPFEFHQSSRSLAFAPSSS 162
              ..|.|:::..........||                                :::.:..|..|
  Rat   142 --RQQRHAVSPRGCPLCPDSGL--------------------------------AQAQSLGPHLS 172

  Fly   163 TTSSARMDWQTLHTQSYPKTTRGETHVSADLSYHQLPESHSHWYPA---------EVHQMEPAAS 218
            ..:.:.:.|.:  :.:||:     ..|:|:           .|.|:         |..:|||:.|
  Rat   173 PVACSGVSWGS--SPAYPR-----PRVAAE-----------SWDPSFLYTETASLERQEMEPSPS 219

  Fly   219  218
              Rat   220  219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH54F	NP_477302.1	HLH	32..83	CDD:278439	23/52 (44%)
Mesp1	NP_001101001.1	HLH	77..130	CDD:278439	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900