DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH54F and ascl1a

DIOPT Version :9

Sequence 1:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_571294.1 Gene:ascl1a / 30466 ZFINID:ZDB-GENE-980526-90 Length:196 Species:Danio rerio


Alignment Length:142 Identity:43/142 - (30%)
Similarity:70/142 - (49%) Gaps:37/142 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RKKRSSSP--------TEFFDDDFDEDASSQSSQPPVQRNAA---NARERMRMRVLSSAYGRLKT 56
            :::|||||        ..|        |....|.|..|.:|.   |.|||.|::::::.:..|:.
Zfish    47 KRQRSSSPELLRCKRRLNF--------AGFGYSLPQQQPHAVARRNERERNRVKLVNNGFATLRE 103

  Fly    57 KLPNIPPDTKLSKLDTLRLATLYIK---QLI-------TAVETG----SHSQNHPHNHNQHHSLN 107
            .:||...:.|:||::|||.|..||:   ||:       .|.::|    :.|||:.::.|   |:.
Zfish   104 HVPNGAANKKMSKVETLRSAVEYIRALQQLLDEHDAVSAAFQSGVLSPTISQNYSNDMN---SMA 165

  Fly   108 HSH-SSTTSSEG 118
            .|. ||.:|.||
Zfish   166 GSPVSSYSSDEG 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH54FNP_477302.1 HLH 32..83 CDD:278439 19/56 (34%)
ascl1aNP_571294.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..54 3/6 (50%)
HLH 94..136 CDD:197674 14/41 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..186 8/22 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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