DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH54F and neurog1

DIOPT Version :10

Sequence 1:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_571116.1 Gene:neurog1 / 30239 ZFINID:ZDB-GENE-990415-174 Length:208 Species:Danio rerio


Alignment Length:206 Identity:56/206 - (27%)
Similarity:76/206 - (36%) Gaps:57/206 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSSPTEFFDDDFDEDA---------SSQSSQPP------------------------VQRN---A 35
            :||....|....|||:         :|...:||                        |::|   .
Zfish    10 TSSCDYSFSHTDDEDSRSSLHPASPASSCGKPPASPAGLQQKKRRRGRARNETTVHVVKKNRRLK 74

  Fly    36 ANARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATLYIKQLITAVETGSHSQNHPHNH 100
            ||.|||.||..|:.|...|::.||..|.||||:|::|||.|..||..|...:......|      
Zfish    75 ANDRERNRMHNLNDALDALRSVLPAFPDDTKLTKIETLRFAHNYIWALSETIRIADQKQ------ 133

  Fly   101 NQHHSLNHSHSSTTSSEGLDTSHMADSSGGGNYNFHNNGHGMSWPFEFHQSSRSLAFAPSSSTTS 165
                  ..|........||  |.|||:...|:       ...|||.....||.|.::..|...:.
Zfish   134 ------GKSRDGPLLLPGL--SCMADAPSPGS-------DSCSWPSGASSSSSSPSYCNSDPGSP 183

  Fly   166 SARMDWQTLHT 176
            :|..|:..|.|
Zfish   184 AAMDDFGYLQT 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH54FNP_477302.1 bHLH_TS_musculin_like 32..87 CDD:381429 26/57 (46%)
neurog1NP_571116.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 9/51 (18%)
bHLH_SF 55..131 CDD:469605 27/75 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..180 7/20 (35%)

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