DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH54F and Ascl1

DIOPT Version :9

Sequence 1:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_032579.2 Gene:Ascl1 / 17172 MGIID:96919 Length:231 Species:Mus musculus


Alignment Length:146 Identity:42/146 - (28%)
Similarity:66/146 - (45%) Gaps:26/146 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RKKRSSSPTEFFDD----DFDEDASSQSSQPPVQRNAANARERMRMRVLSSAYGRLKTKLPNIPP 63
            :::||||| |....    :|.....|...|.|......|.|||.|:::::..:..|:..:||...
Mouse    82 KRQRSSSP-ELMRCKRRLNFSGFGYSLPQQQPAAVARRNERERNRVKLVNLGFATLREHVPNGAA 145

  Fly    64 DTKLSKLDTLRLATLYIK---QLI-------TAVETGSHSQNHPHNHNQHHSLNHSHSSTTSSEG 118
            :.|:||::|||.|..||:   ||:       .|.:.|..|.....|::  :.||....|..||. 
Mouse   146 NKKMSKVETLRSAVEYIRALQQLLDEHDAVSAAFQAGVLSPTISPNYS--NDLNSMAGSPVSSY- 207

  Fly   119 LDTSHMADSSGGGNYN 134
                    ||..|:|:
Mouse   208 --------SSDEGSYD 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH54FNP_477302.1 HLH 32..83 CDD:278439 17/53 (32%)
Ascl1NP_032579.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..92 6/10 (60%)
HLH 129..171 CDD:197674 14/41 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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