DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH54F and Twist2

DIOPT Version :10

Sequence 1:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_031881.1 Gene:Twist2 / 13345 MGIID:104685 Length:160 Species:Mus musculus


Alignment Length:101 Identity:35/101 - (34%)
Similarity:49/101 - (48%) Gaps:22/101 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RKKRSSSPTEFFDDDFDEDAS----------SQSSQP----PVQRNAANARERMRMRVLSSAYGR 53
            ||:|.|..:       .||.|          |.|:|.    ..||..||.|||.|.:.|:.|:..
Mouse    31 RKRRYSKKS-------SEDGSPTPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFAA 88

  Fly    54 LKTKLPNIPPDTKLSKLDTLRLATLYIKQLITAVET 89
            |:..:|.:|.| ||||:.||:||..||..|...:::
Mouse    89 LRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQS 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH54FNP_477302.1 bHLH_TS_musculin_like 32..87 CDD:381429 25/54 (46%)
Twist2NP_031881.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 10/38 (26%)
bHLH_TS_TWIST2 51..132 CDD:381543 28/74 (38%)

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