DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH54F and atoh7

DIOPT Version :10

Sequence 1:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster
Sequence 2:XP_012822645.1 Gene:atoh7 / 100493495 XenbaseID:XB-GENE-989022 Length:115 Species:Xenopus tropicalis


Alignment Length:74 Identity:29/74 - (39%)
Similarity:42/74 - (56%) Gaps:1/74 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QRNAANARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATLYIKQLITAV-ETGSHSQN 95
            :|.|||||||.||:.|::|:..|:..:|....|.||||.:||::|..||..|...: |...:|:.
 Frog    11 RRMAANARERRRMQGLNTAFDSLRKVVPQWGEDKKLSKYETLQMALSYIMALNRILSEAERYSRA 75

  Fly    96 HPHNHNQHH 104
            .|......|
 Frog    76 DPGEWTNMH 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH54FNP_477302.1 bHLH_TS_musculin_like 32..87 CDD:381429 25/54 (46%)
atoh7XP_012822645.1 bHLH_TS_ATOH7 4..72 CDD:381557 26/60 (43%)

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