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Protein Alignment HLH54F and lyl1
DIOPT Version :9
Sequence 1: | NP_477302.1 |
Gene: | HLH54F / 37027 |
FlyBaseID: | FBgn0022740 |
Length: | 242 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_009300341.1 |
Gene: | lyl1 / 100333113 |
ZFINID: | ZDB-GENE-090807-1 |
Length: | 326 |
Species: | Danio rerio |
Alignment Length: | 137 |
Identity: | 48/137 - (35%) |
Similarity: | 67/137 - (48%) |
Gaps: | 22/137 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 RKKRSSSPTEFFDDDFDEDASSQSSQPP---VQRNAANARERMRMRVLSSAYGRLKTKLPNIPPD 64
|.||..| |.| :...:|..|| .:|...|:|||.|.:.::.|:..|:..:|..|||
Zfish 177 RMKRRPS-THF-------EVEIRSDGPPQKLARRVFTNSRERWRQQNVNGAFSELRKLIPTHPPD 233
Fly 65 TKLSKLDTLRLATLYI---KQLIT----AVETGSHSQNHPHNHNQHHSLNHSHSSTTSSEGLDTS 122
.||||.:.||||..|| :||:. ..|||..: |.|..:.|..|..:.||.:|..| ||.
Zfish 234 RKLSKNEILRLAMKYIDFLEQLLNDQSQPEETGQRA--HAHTPSTHSLLLLTASSGSSCYG-DTD 295
Fly 123 HMADSSG 129
..:|:|
Zfish 296 -SEESTG 301
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH54F | NP_477302.1 |
HLH |
32..83 |
CDD:278439 |
22/53 (42%) |
lyl1 | XP_009300341.1 |
HLH |
206..256 |
CDD:197674 |
22/49 (45%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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