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Protein Alignment HLH54F and si:ch211-246m6.4
DIOPT Version :9
Sequence 1: | NP_477302.1 |
Gene: | HLH54F / 37027 |
FlyBaseID: | FBgn0022740 |
Length: | 242 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_001340709.1 |
Gene: | si:ch211-246m6.4 / 100000527 |
ZFINID: | ZDB-GENE-050208-498 |
Length: | 193 |
Species: | Danio rerio |
Alignment Length: | 137 |
Identity: | 42/137 - (30%) |
Similarity: | 66/137 - (48%) |
Gaps: | 25/137 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 PRKKRSSSPTEFFDDDFDEDASSQSS---QP-------------------PVQRNAANARERMRM 44
|.....|.|::..|.|...|:|.:|: .| ..||.|||||||.|.
Zfish 32 PAHDTQSLPSDPDDLDSGSDSSEKSTGAGSPTRGHREVRRRRGSRRLAGVSKQRQAANARERDRT 96
Fly 45 RVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATLYIKQLITAVETGSHSQN-HPHNHNQHHSLNH 108
..:::|:..|:|.:|..|.|.||||::|||||:.||..|...:..|...:: .| ..::|::..
Zfish 97 HSVNTAFTSLRTLIPTEPADRKLSKIETLRLASSYISHLANVLLLGEDCRDGQP--CLKYHNILQ 159
Fly 109 SHSSTTS 115
|:::..|
Zfish 160 SNANLKS 166
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH54F | NP_477302.1 |
HLH |
32..83 |
CDD:278439 |
27/50 (54%) |
si:ch211-246m6.4 | XP_001340709.1 |
HLH |
84..135 |
CDD:278439 |
27/50 (54%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170583768 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.830 |
|
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