DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sardh and GCV1

DIOPT Version :10

Sequence 1:NP_611263.1 Gene:Sardh / 37026 FlyBaseID:FBgn0034276 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_010302.1 Gene:GCV1 / 851582 SGDID:S000002426 Length:400 Species:Saccharomyces cerevisiae


Alignment Length:486 Identity:100/486 - (20%)
Similarity:179/486 - (36%) Gaps:129/486 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 SYVKNYSMVFK-YDQPLAGRDFQKDPLHDEMMKAGAVMEEKQGWERPGFFLPTGSKKAVVQPYDW 493
            |.:|  .:||| ::..|     :|..|||..:..|..|....|:..|..:    ..:..::.::|
Yeast     2 SIIK--KIVFKRFNSTL-----KKTALHDLHVSLGGTMVPYAGYSMPVLY----KGQTHIESHNW 55

  Fly   494 YGSYVHQRHKDSEYERVLDGDLHYSRFSEYHDLIGSEALACRNNAVVFNMSYFAKLLLDGPQAQE 558
                                                    .|.||.:|::|:..:..|.||.:.:
Yeast    56 ----------------------------------------TRTNAGLFDVSHMLQSKLSGPHSVK 80

  Fly   559 AADWLFSANTNRDP--SKTVYTCALNDAGGVEADVTISRLAPGSGEVYNPKINGQGFYIVAGGAS 621
            ....:...:.|..|  |.|: :..||..|||..|..|::           :.:...||||.....
Yeast    81 FLQRVTPTDFNALPVGSGTL-SVLLNPQGGVVDDTIITK-----------ENDDNEFYIVTNAGC 133

  Fly   622 AFYTYSVLLAEIRRKGFNASLKDLTAEL----GVISIQGPNSRKILQPLID-----CDLSDEHVA 677
            |.........|::    |.|..|...::    .::::|||.::.:|:||:.     .||.:....
Yeast   134 AERDTEFFHDELQ----NGSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLKELFFG 194

  Fly   678 PNSTRLAKFGDVGLRLLRVSFVGELGYELHVPKKDCAAVYRSLMKAGAGEDLRNAGYRSLYSLSS 742
            .......|.|.: :::.|..:.||.|:|:.:..:........|:   |...::..|..:..||..
Yeast   195 QRHEFALKDGSL-VQIARGGYTGEDGFEISIANEKAVEFAEQLL---ANPVMKPIGLAARDSLRL 255

  Fly   743 EKGYHLWSFDLRPDDTPLEAGLGFTCRKTGAD-------YRGKAAIENQ--RAEGLKKRLVYLTL 798
            |.|..|:..:|....||:||.|.:...|:..|       :.|.|.|.:|  .....|.|:.:..|
Yeast   256 EAGMCLYGHELDESITPVEAALNWVISKSRRDLVDQKYWFNGYAKIMDQLNNKTYSKVRVGFKYL 320

  Fly   799 RDQVPIWGLEG-VYRNG---------EPVGILRRAEYAYTLGK-SLGQTYVSRPDGK-----IID 847
            :        :| ..|||         ..||::.....:.||.. ::||.||.:...|     ::.
Yeast   321 K--------KGPAARNGVKIFLPDAETEVGLVTSGSASPTLNNINIGQAYVQKGYHKKGTKLLVQ 377

  Fly   848 ADYIRNGEYEVDILGKKYRADCHLRSPFDPT 878
               :||..|.:::          .:.|..||
Yeast   378 ---VRNKFYPIEL----------AKMPLVPT 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SardhNP_611263.1 DadA 37..411 CDD:440429
FAO_M 398..450 CDD:465100 6/20 (30%)
GcvT 447..882 CDD:440173 94/468 (20%)
GCV1NP_010302.1 gcvT 16..395 CDD:273121 93/468 (20%)
Blue background indicates that the domain is not in the aligned region.

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