DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sardh and amt

DIOPT Version :10

Sequence 1:NP_611263.1 Gene:Sardh / 37026 FlyBaseID:FBgn0034276 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001006021.1 Gene:amt / 450000 ZFINID:ZDB-GENE-041010-114 Length:409 Species:Danio rerio


Alignment Length:374 Identity:85/374 - (22%)
Similarity:149/374 - (39%) Gaps:81/374 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   451 QKDPLHDEMMKAGAVMEEKQGWERPGFFLPTGSKKAVVQPYDWYGSYVHQRHKDSEYERVLDGDL 515
            :|.||:|.....|..|.|..||..|            ||            :|||.    :...:
Zfish    41 RKTPLYDFHRAHGGKMVEFAGWSMP------------VQ------------YKDSH----ITSHM 77

  Fly   516 HYSRFSEYHDLIGSEALACRNNAVVFNMSYFAKLLLDGPQAQEAADWLFSAN----TNRDPSKTV 576
            |                 .|.:..:|::|:..:..:.|....:..:.|...:    .:...:.::
Zfish    78 H-----------------TRQHCSIFDVSHMLQTKVYGKDRVKFIESLIVGDIAELKDNQGTLSL 125

  Fly   577 YTCALNDAGGVEADVTISRLAPGSGEVYNPKINGQGFYIVAGGASAFYTYSVL---LAEIRRKGF 638
            :|   |..||:..|:.::            |.:....|:|:....|....:.:   |.|.:..|.
Zfish   126 FT---NSKGGIMDDLIVT------------KTDQDYLYVVSNAGCADKDSAHMQARLQEFKSAGH 175

  Fly   639 NASLKDLTAELGVISIQGPNSRKILQPLIDCDLSDEHVAPNSTRLAKFGDVGLRLLRVSFVGELG 703
            :..|:.:  |..:|::|||:..::||..:..||. :.....|.....||..|.|:.|..:.||.|
Zfish   176 DVDLEFM--EESLIALQGPSMARVLQKGVGDDLK-KLTFMTSVLTPVFGIQGCRVTRCGYTGEDG 237

  Fly   704 YELHVPKKDCAAVYRSLMKAGAGEDLRNAGYRSLYSLSSEKGYHLWSFDLRPDDTPLEAGLGFTC 768
            .|:.||.||...:...|:   |..:::.||..:..||..|.|..|:..|:....||:||.|.:|.
Zfish   238 VEISVPSKDVVLLTEKLL---ADSEVKLAGLGARDSLRLEAGLCLYGNDIDETTTPVEATLVWTI 299

  Fly   769 ---RKTGADYRGKAAIENQ-RAEGLKKRLVYLT----LRDQVPIWGLEG 809
               |:...|:.|...|..| :|:..:||:..::    :|...||...:|
Zfish   300 GKRRRQARDFPGADIIVPQIKAKTPRKRVGLISTGPPVRQHTPILSSDG 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SardhNP_611263.1 DadA 37..411 CDD:440429
FAO_M 398..450 CDD:465100
GcvT 447..882 CDD:440173 85/374 (23%)
amtNP_001006021.1 gcvT 2..407 CDD:476863 85/374 (23%)
Blue background indicates that the domain is not in the aligned region.

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