DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sardh and Pdpr

DIOPT Version :9

Sequence 1:NP_611263.1 Gene:Sardh / 37026 FlyBaseID:FBgn0034276 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_938050.1 Gene:Pdpr / 319518 MGIID:2442188 Length:878 Species:Mus musculus


Alignment Length:912 Identity:270/912 - (29%)
Similarity:425/912 - (46%) Gaps:104/912 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 HRILQQASRRGIS------KQVREDGGARREPSGFLPGAADVVVIGGGSAGCHTLYHLARRGVK- 61
            :|:|....|:..|      ...|.........|..||..|.||:.|||..|....|||::.|.: 
Mouse     3 YRLLSIVQRQRTSPGWQTWSSARSSTSTAEAHSIALPAQAQVVICGGGIMGTSVAYHLSKMGWQD 67

  Fly    62 AVLLERAQLTAGTTWHTAGLLWRLRPNDVDIQLLANSRRMLQQLEEETELDPGWIQNGGIFIAHN 126
            .||||:.:|.||:|...||:|...|.:.|:.::...|.::..|||:||.:..|:::.|.|.:|..
Mouse    68 IVLLEQGRLAAGSTRFCAGILSTARHSSVEQKMANYSNKLYHQLEQETGIQTGYLRTGSISLAQT 132

  Fly   127 ETRLDEYRRLATVGSALGIENQVLSPEDTQKLFPLLDPSAFVGALYSPGDGVMDPAMLCAALKKA 191
            :.||...:|:.:..:.:||.::::||:...:|.|||:....|||:|.|.|.|:..|.:..||..|
Mouse   133 QDRLISLKRINSRLNVVGIPSEIISPKKVAELHPLLNVHDLVGAMYVPEDAVVSSADVALALASA 197

  Fly   192 ATNLGAQVIENCGVDDLLLEQTARGKKVVGVSTPFGDIKAEKVVNATGVWGRDLVARHGTHL--P 254
            |:..|.|:.:...|..:|:::    .:|.||.|..|.|:.:..||..|.|..:|...:...|  |
Mouse   198 ASQNGVQIYDRTSVLHVLIKK----GQVTGVETDKGQIECQYFVNCAGQWAYELGLSNEEPLSIP 258

  Fly   255 LVPMKHAYIVSE--SIPGVRGLPNIRDHDYSTYFRIQGDAICMGGYEPNPILLEPVPKDFHFGLY 317
            |...:|.|:::.  ..|.....|.|.|.|...|.|.....|..||:|.||   :|:   |..|..
Mouse   259 LHACEHFYLLTRPWDTPLQSNTPTIVDADGRIYIRNWQGGILSGGFEKNP---KPI---FTEGKN 317

  Fly   318 EL-------DWSVFETHVEGAQKLCPSYAKYGVKSTVCGPESFTPDHKPLMGPDPNLDGLYHNCG 375
            :|       ||..||..:....:..|:.....:...|..||:||||.|.:||..|.:.|.:...|
Mouse   318 QLEIQNLREDWDHFEPLLSSLLRRMPALETLEILKLVNCPETFTPDMKCIMGESPVVQGYFVLAG 382

  Fly   376 FNSAGMMFGGGCGEQTALWVIQGQPDLPMFGFDLRRFTQEQGKAIQWIREKSHESYVKNYSM-VF 439
            .||||:..|||.|:..|.|::.|.|...::..||:||...|... .::|.:..|.....|.: |.
Mouse   383 MNSAGLSLGGGAGKFLAEWMVYGYPSENVWELDLQRFGALQSSR-TFLRHRVMEVMPLIYDLKVP 446

  Fly   440 KYDQPLAGRDFQKDPLHDEMMKAGAVMEEKQGWERPGFFLPTG-------SKKAVVQPYDWYGSY 497
            ::|.. .||..:..||:|.:...||...||.|:|||.:|:|..       ..|...:| ||:   
Mouse   447 RWDFQ-TGRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVPPNKDLLALEQSKTFYKP-DWF--- 506

  Fly   498 VHQRHKDSEYERVLDGDLHYSRFSEYHDLIGSEALACRNNAVVFNMSYFAK--LLLDGPQAQEAA 560
                                       |::.||...|:....|.:||.|.|  :...|.:|.|:.
Mouse   507 ---------------------------DIVESEVKCCKEAVCVIDMSSFTKFEITSTGDEALESL 544

  Fly   561 DWLFSANTNRDPSKTVYTCALNDAGGVEADVTISRLAPGSGEVYNPKINGQGFYIVAGGASAFYT 625
            .:||..:.:......|:|..||:.||.|.|.:|:||...|            |::::......:.
Mouse   545 QYLFCNDLDVPVGHIVHTGMLNEYGGYENDCSIARLTKRS------------FFMISPTDQQVHC 597

  Fly   626 YSVLLAEIRRKGFNASLKDLTAELGVISIQGPNSRKILQPLIDCDLSDEHVAPNSTRLAKFGDV- 689
            :: .|.:...|..|..|:|:|.:...:::.||.:..:|..|....::.:|.   .|...|...| 
Mouse   598 WA-WLNKYLPKDSNLLLEDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHF---PTLFCKEMSVG 658

  Fly   690 ---GLRLLRVSFVGELGYELHVPKKDCAAVYRSLMKAGAGEDLRNAGYRSLYSLSSEKGYHLWSF 751
               |:|::.::..||.|:.|::|.:....||..:|..|....:|||||.:|.||..||.:..|..
Mouse   659 YANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQ 723

  Fly   752 DLRPDDTPLEAGLGFTCR-KTGADYRGKAAIENQRAEGLKKRLVYLTLRDQ------VPIWGLEG 809
            ||....||||.|.....: :.|.|:.|:.|:..|:..|:.|||....|.|.      .|.|| |.
Mouse   724 DLNTLTTPLECGGESRVKLEKGIDFIGRDALLQQKQTGVYKRLAMFILDDHDTDLDLWPWWG-EP 787

  Fly   810 VYRNGEPVGILRRAEYAYTLGKSLGQTYV---SRPDG--KIIDADYIRNGEYEVDILGKKYRADC 869
            :||||:..|....:.|:|||.:.:...||   |...|  :::..|:|..||||:||.|.:::|..
Mouse   788 IYRNGKYAGKTTSSAYSYTLERHVCLGYVHNFSEDSGEEQVVTTDFINRGEYEIDIAGHRFQAKA 852

  Fly   870 HL 871
            .|
Mouse   853 KL 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SardhNP_611263.1 DadA 33..412 CDD:223737 128/390 (33%)
NADB_Rossmann 37..>76 CDD:304358 18/39 (46%)
nuc_hydro 203..>281 CDD:294156 22/81 (27%)
FAO_M 398..449 CDD:292961 13/51 (25%)
GcvT 446..884 CDD:223481 128/451 (28%)
GCV_T 456..767 CDD:279857 85/323 (26%)
GCV_T_C 774..867 CDD:285832 36/103 (35%)
PdprNP_938050.1 DadA 38..425 CDD:223737 131/396 (33%)
GcvT 452..867 CDD:223481 128/451 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D96522at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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