DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sardh and Dmgdh

DIOPT Version :10

Sequence 1:NP_611263.1 Gene:Sardh / 37026 FlyBaseID:FBgn0034276 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_038957650.1 Gene:Dmgdh / 245961 RGDID:620453 Length:884 Species:Rattus norvegicus


Alignment Length:865 Identity:265/865 - (30%)
Similarity:422/865 - (48%) Gaps:76/865 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ADVVVIGGGSAGCHTLYHLARRGVK-AVLLERAQLTAGTTWHTAGLLWRLRPNDVDIQLLANSRR 100
            |:.|:||||..|....||||:.|:: .||||:::||||:|||.|||.....|.....::..:|.:
  Rat    70 AETVIIGGGCVGVSLAYHLAKAGMRDVVLLEKSELTAGSTWHAAGLTTYFHPGINLKKIHYDSIK 134

  Fly   101 MLQQLEEETELDPGWIQNGGIFIAHNETRLDEYRRLATVGSALGIENQVLSPEDTQKLFPLLDPS 165
            :.::|||||....|:.|.|.|.:|....|:||::...|..:....|..::.||...:|||||:..
  Rat   135 LYERLEEETGQVVGFHQPGSIRLATTPERVDEFKYQMTRTNWHATEQYIIEPEKIHELFPLLNMD 199

  Fly   166 AFVGALYSPGDGVMDPAMLCAALKKAATNLGAQVIENCGVDDLLLEQTARGKKVVGVSTPFGDIK 230
            ..:..||:||||.:||..|..||...|...||.:.....|..|    ..|......|.||.|.::
  Rat   200 KILAGLYNPGDGHIDPYSLTMALATGARKYGALLKYPAPVTSL----KPRPDGTWDVETPQGSVR 260

  Fly   231 AEKVVNATGVWGRDLVARHGTHLPLVPMKHAYIVSESIPGV----RGLPNIRDHDYSTYFRIQGD 291
            |.::|||.|.|.|::....|...||:|::|.|:::.:||.|    |.||.:||.:.|.|.|.:.|
  Rat   261 ANRIVNAAGFWAREVGKMIGLDHPLIPVQHQYVITSTIPEVKALKRELPVLRDLEGSYYLRQERD 325

  Fly   292 AICMGGYEPNPIL-------LEPVPKDFHFGLYELDWSVFETHVEGAQKLCPSYAKYGVKSTVCG 349
            .:..|.||....:       ...||..|...|:|.|......|||.|.::.|...|..:.:.|.|
  Rat   326 GLLFGPYESQEKMKLQASWVAHGVPPGFGKELFESDLDRITEHVEAAMEMVPVLKKADIINIVNG 390

  Fly   350 PESFTPDHKPLMGPDPNLDGLYHNCGFNSAGMMFGGGCGEQTALWVIQGQPDLPMFGFDLRRFTQ 414
            |.:::||..|::||...:...:...|| ..|::..||.|...:.|::.|:|...:...|..|:  
  Rat   391 PITYSPDILPMVGPHQGVRNYWVAIGF-GYGIIHAGGVGTYLSDWILHGEPPFDLIELDPNRY-- 452

  Fly   415 EQGK--AIQWIREKSHESYVKNYSMVFKYDQPLAGRDFQKDPLHDEMMKAGAVMEEKQGWERPGF 477
              ||  ..|:...|:.|||..|..:.:..::..|||..|:.....:::::...|....|||:|.:
  Rat   453 --GKWTTTQYTEAKARESYGFNNIVGYPKEERFAGRPTQRVSGLYKILESKCSMGFHAGWEQPHW 515

  Fly   478 FLPTGSKKAVVQPYDWYGSYVHQRHKDSEYERVLDGDLHYSRFSEYHDLIGSEALACRNNAVVFN 542
            |...|                    :|::|....       |.:.:.:.:|||.........|.:
  Rat   516 FYKPG--------------------QDTQYRPSF-------RRTNWFEPVGSEYKQVMQRVGVID 553

  Fly   543 MSYFAKLLLDGPQAQEAADWLFSANTNRDPSKTVYTCALNDAGGVEADVTISRLAPGSGEVYNPK 607
            :|.|.|..:.|..:.:..|.| .||.......|..:..|...|.|.|::|:|..:||.       
  Rat   554 LSPFGKFNIKGQDSTQLLDHL-CANVIPKVGFTNISHMLTPRGRVYAELTVSHQSPGE------- 610

  Fly   608 INGQGFYIVAGGASAFYTYSVLLAEIRRKGFNASLKDLTAELGVISIQGPNSRKILQPLIDCDLS 672
                 |.::.|..|..:....:.....|.|::..::::|.||||:.:.||.:|::||.|...|||
  Rat   611 -----FLLITGSGSELHDLRWIEEAAVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLTSEDLS 670

  Fly   673 DEHVAPNSTRLAKFGDVGLRLLRVSFVGELGYELHVPKKDCAAVYRSLMKAGAGEDLRNAGYRSL 737
            |:......|:..|..|:.:..:|:|:.||||:||:..::|.||:|..:|.||..|.:.|.|..:|
  Rat   671 DDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDSAALYERIMNAGQEEGIDNFGTYAL 735

  Fly   738 YSLSSEKGYHLWSFDLRPDDTPLEAGLGFTCR-KTGADYRGKAAIENQRAEGLKKRLVYLTL-RD 800
            .:|..||.:..|..::..|..||||||.:..: ...|::.||.|::..:|:|||:|||.||| .|
  Rat   736 NALRLEKAFRAWGSEMNCDTNPLEAGLDYFIKLNKPANFTGKQALKQIKAKGLKRRLVCLTLATD 800

  Fly   801 QVPIWGLEGVYRNGEPVGILRRAEYAYTLGKSLGQTYVSRPDGKIIDADYIRNGEYEVDILGKKY 865
            .|...|.|.|:..|:.:|......|:|::.|||...||.....::       ..:.||::|||.|
  Rat   801 NVDPEGNESVWYKGKVIGNTTSGSYSYSIQKSLAFAYVPVELSEV-------GQQVEVELLGKNY 858

  Fly   866 RADCHLRSPF---DPTGQRV 882
            .|.. ::.|.   :||..|:
  Rat   859 PATI-IQEPLVLTEPTRTRL 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SardhNP_611263.1 DadA 37..411 CDD:440429 129/385 (34%)
FAO_M 398..450 CDD:465100 15/53 (28%)
GcvT 447..882 CDD:440173 125/439 (28%)
DmgdhXP_038957650.1 DadA 69..451 CDD:440429 129/385 (34%)
FAO_M 437..492 CDD:465100 16/58 (28%)
GcvT 508..877 CDD:440173 121/416 (29%)

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