DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sardh and Sardh

DIOPT Version :9

Sequence 1:NP_611263.1 Gene:Sardh / 37026 FlyBaseID:FBgn0034276 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_619606.1 Gene:Sardh / 192166 MGIID:2183102 Length:919 Species:Mus musculus


Alignment Length:863 Identity:451/863 - (52%)
Similarity:599/863 - (69%) Gaps:8/863 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PSGFLPGAADVVVIGGGSAGCHTLYHLARRGV-KAVLLERAQLTAGTTWHTAGLLWRLRPNDVDI 92
            ||..||..|:||||||||.||.||||||:.|| .||||||.:||:|||||||||||:|||:||::
Mouse    60 PSQPLPSTANVVVIGGGSLGCQTLYHLAKLGVGGAVLLERERLTSGTTWHTAGLLWQLRPSDVEV 124

  Fly    93 QLLANSRRML-QQLEEETELDPGWIQNGGIFIAHNETRLDEYRRLATVGSALGIENQVLSPEDTQ 156
            :|||::|::: :.|||||.|..|||||||:|||.|:.||:||:||.::|.|.|||:.||||.:|:
Mouse   125 ELLAHTRQVVSRDLEEETGLHTGWIQNGGLFIASNQQRLNEYKRLMSLGKAYGIESHVLSPAETK 189

  Fly   157 KLFPLLDPSAFVGALYSPGDGVMDPAMLCAALKKAATNLGAQVIENCGVDDLLLEQTARG-KKVV 220
            .|:||::.....|.||.|.||.||||..|..|.:||...||||||||.|..:.:.....| ::|.
Mouse   190 SLYPLMNVDDLYGTLYVPQDGTMDPAGTCTTLTRAAVARGAQVIENCAVTGIRVRTDDFGVRRVA 254

  Fly   221 GVSTPFGDIKAEKVVNATGVWGRDLVARHGTHLPLVPMKHAYIVSESIPGVRGLPNIRDHDYSTY 285
            .|.|..|.|:...|||..|||...:....|..:|||.|.|||:|:|.|.|::.:||:||||.|.|
Mouse   255 AVETEHGSIQTPCVVNCAGVWASKVGRMAGVKVPLVAMHHAYVVTERIEGIQNMPNVRDHDASVY 319

  Fly   286 FRIQGDAICMGGYEPNPILLEPVPKDFHFGLYELDWSVFETHVEGAQKLCPSYAKYGVKSTVCGP 350
            .|:||||:.:||||.|||..|.|...|.|||::|||.||..|:|||....|...|.|:|||||||
Mouse   320 LRLQGDALSVGGYEANPIFWEEVSDKFAFGLFDLDWDVFTQHIEGAINRVPVLEKTGIKSTVCGP 384

  Fly   351 ESFTPDHKPLMGPDPNLDGLYHNCGFNSAGMMFGGGCGEQTALWVIQGQPDLPMFGFDLRRFTQE 415
            ||||||||||||..|.|.|.:..|||||||||.|||||::.|.|::.|:|:..|:.:|:|||...
Mouse   385 ESFTPDHKPLMGEAPELRGFFLGCGFNSAGMMLGGGCGQELAHWIVHGRPEKDMYSYDIRRFHHS 449

  Fly   416 QGKAIQWIREKSHESYVKNYSMVFKYDQPLAGRDFQKDPLHDEMMKAGAVMEEKQGWERPGFFLP 480
            .....:||||:|||||.||||:||.:|:|||||:.::||||:|::..|.|.:|:|||||||:|.|
Mouse   450 LTDHTRWIRERSHESYAKNYSVVFPHDEPLAGRNMRRDPLHEELLGQGCVFQERQGWERPGWFNP 514

  Fly   481 TGSKKAVVQPYDWYGSYVHQRHKDSEYERVLDGDLHYSRFSEYHDLIGSEALACRNNAVVFNMSY 545
              .:.|.|..||:||:|.:|.|||..|.|:| ||.:...|..:|.:|..|.||||..|.||||||
Mouse   515 --QETAQVLDYDYYGAYGNQAHKDYTYSRLL-GDEYTFDFPPHHHMIQKECLACRGAAAVFNMSY 576

  Fly   546 FAKLLLDGPQAQEAADWLFSANTNRDPSKTVYTCALNDAGGVEADVTISRLAPGS-GEVYNPKIN 609
            |.|..|.|..|::||||||||:.||.|..|||||.||..||.|:|:|:||||||: .....|...
Mouse   577 FGKFYLLGVDARKAADWLFSADVNRPPGSTVYTCMLNQRGGTESDLTVSRLAPGTQASPLVPAFE 641

  Fly   610 GQGFYIVAGGASAFYTYSVLLAEIRRKGFNASLKDLTAELGVISIQGPNSRKILQPLIDCDLSDE 674
            |..:|:..|||.|.:.:|.:...::.:.|...|.|.:.:||::|||||.||.|||.::|.|||:|
Mouse   642 GDCYYLAVGGAVAQHNWSHINTVLQDQEFRCQLMDSSEDLGMLSIQGPASRDILQDVLDADLSNE 706

  Fly   675 HVAPNSTRLAKFGDVGLRLLRVSFVGELGYELHVPKKDCAAVYRSLMKAGAGEDLRNAGYRSLYS 739
            ....::.:|.:.....:|.:|:|||||||:|||||:..|..|||::|.|||...|.|||||::.|
Mouse   707 AFPFSTHQLVRAAGHLVRAIRLSFVGELGWELHVPRASCLPVYRAVMAAGARHGLVNAGYRAIDS 771

  Fly   740 LSSEKGYHLWSFDLRPDDTPLEAGLGFTCR-KTGADYRGKAAIENQRAEGLKKRLVYLTLRDQVP 803
            ||.||||..|..||||||:||||||.|||: ||...:.|:.|:|.|||.||::||:.||:.::||
Mouse   772 LSIEKGYRHWHADLRPDDSPLEAGLAFTCKLKTSVPFLGREALEKQRATGLRRRLICLTVEEEVP 836

  Fly   804 IWGLEGVYRNGEPVGILRRAEYAYTLGKSLGQTYVSRPDGKIIDADYIRNGEYEVDILGKKYRAD 868
            ::|||.::|||:.||.:|||::.:|:.|::...|:..|.|..:..|:::||||.::.:|..|.|.
Mouse   837 MFGLEAIWRNGQVVGHVRRADFGFTVNKTIAYGYIRDPSGGPVSLDFVKNGEYALERMGVTYAAQ 901

  Fly   869 CHLRSPFDPTGQRVLGNY 886
            .||:|||||..:||.|.|
Mouse   902 VHLKSPFDPDNKRVKGIY 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SardhNP_611263.1 DadA 33..412 CDD:223737 213/381 (56%)
NADB_Rossmann 37..>76 CDD:304358 29/39 (74%)
nuc_hydro 203..>281 CDD:294156 30/78 (38%)
FAO_M 398..449 CDD:292961 27/50 (54%)
GcvT 446..884 CDD:223481 214/439 (49%)
GCV_T 456..767 CDD:279857 156/311 (50%)
GCV_T_C 774..867 CDD:285832 37/92 (40%)
SardhNP_619606.1 DadA 64..448 CDD:223737 215/386 (56%)
FAO_M 431..486 CDD:379830 28/54 (52%)
GcvT 480..917 CDD:223481 212/438 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849731
Domainoid 1 1.000 415 1.000 Domainoid score I667
eggNOG 1 0.900 - - E1_COG0404
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5149
Inparanoid 1 1.050 912 1.000 Inparanoid score I366
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53337
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008062
OrthoInspector 1 1.000 - - oto93516
orthoMCL 1 0.900 - - OOG6_107060
Panther 1 1.100 - - LDO PTHR13847
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3396
SonicParanoid 1 1.000 - - X6012
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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