DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5002 and slc26a3.1

DIOPT Version :9

Sequence 1:NP_611262.1 Gene:CG5002 / 37025 FlyBaseID:FBgn0034275 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001129155.1 Gene:slc26a3.1 / 563962 ZFINID:ZDB-GENE-041210-180 Length:745 Species:Danio rerio


Alignment Length:624 Identity:142/624 - (22%)
Similarity:277/624 - (44%) Gaps:143/624 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KLC---------RPSTVTNKFPILKWLPRYRL-EYIMQDFIAGFTVGLTTIPQAIAYGVVAGLEP 80
            |||         ..:...:.||.:.|:..|:: |:::.|.::|.:.||..:.|.:|:.::|.|.|
Zfish    49 KLCLCCSCDAKRAKNAALSLFPFIGWMKDYKIKEWLLGDIVSGISTGLVAVLQGLAFSLLASLPP 113

  Fly    81 QYGLYSAFMGCFTYIVFGSCKDVTIATTAIMALMVNQYAT-ISPD-------------------- 124
            .||||:||.....|...|:.:.:::....|::|||....| :.||                    
Zfish   114 GYGLYTAFFPAIIYFFLGTSRHLSVGAFPILSLMVGAVVTRLVPDEGPSFNITGFEGLSLEQQRV 178

  Fly   125 -YAVLVCFLAGCIVLLLGLLNMGVLVRFISIPVITGFTMAAATTIGSAQINNIVGLTSPSND--- 185
             .|..|.||.|...|::|||.:|.:|.::|..:::|||.|||..|..:|:..::||..|..:   
Zfish   179 LVASSVTFLMGAFQLVMGLLQVGFIVMYLSETLVSGFTTAAAVHILVSQLRFVLGLDFPGINGPL 243

  Fly   186 -LLPAWKNFFTHLTSIRLWDALLGVSSLVFLLLMTRVKDIKWGNRIFWKYLGLSRNALAV----- 244
             ::......|:.:||..:.|.:..::.:..:|::..:.|             ..::.|.|     
Zfish   244 AIIYTLVEVFSRITSTNVADLVTSIAIMALVLIVKEIND-------------RFKSKLPVPIPIE 295

  Fly   245 IFGTFLAYILSRDGNQPFRVTGNITAGVPPFRLPPFSTTVDGEYVSFGEMISTVGASLGSIPLIS 309
            :..|.:|..:|...|...|                |...:.||.|:..|  |.|..:|..|...:
Zfish   296 VIMTVIACGVSYAFNFEER----------------FDVVIVGEMVNGYE--SPVAPNLEVIEETA 342

  Fly   310 I----LEIVAISKAFSKGKI--------VDASQEMVALGMCNIMGSFVLSMPVTGSFTRTAVNNA 362
            :    :.||..:.|||..|:        :|.:||::|.|:.|:.|:...|...:.:.:|||:..:
Zfish   343 VEAFPMAIVGFAVAFSVAKVYSVKHDYTIDGNQELIAFGVSNMFGASFRSFAASTALSRTAIQES 407

  Fly   363 SGVKTPLGGAVTGALVLMAL---AFLTQTFYFIPKCTLAAIIIAAMIS-LVELHKIKDMWKSKKK 423
            :|.||.:.|.::..:||:.:   .||.:.   :|:..|.|::|..:.. |::..::..:|::.:.
Zfish   408 TGGKTQIAGILSAMMVLIVIVGVGFLLEP---LPRSVLGALVIVNLKGMLMQFSELPFLWRNDRP 469

  Fly   424 DLFPFVVTVLTCMFWSLEYGILCGIGANMVYILYSSARPHVDIKLEKINGHE------------- 475
            |...::||.:..:|..|:.|:..||||.:..::|.:..|...: |..|:|.:             
Zfish   470 DFVTWMVTFMASLFLGLDLGLAVGIGAELFTVVYRTQFPRCSV-LANISGTDLYRDRKDYTSIYE 533

  Fly   476 ---VSVVDVKQKLDYASAEYLKEKVV--------RFLNNQN---GETQLVVIKGE-EIN------ 519
               |.:..:...:.:|:.::.::|:|        |.|..:|   .:.:.::..|| |::      
Zfish   534 PDGVKIFKIPSPIFFANIDFFRDKLVQEVGFNPMRVLKKRNKALRKIRKMLCNGELEVSDRGPVL 598

  Fly   520 ---SIDYTVAMNIVSMKGDLEALNCAM------ICWNWN 549
               |:|        :.:|.:|.|:..:      |..|||
Zfish   599 RQPSVD--------TSEGSMEDLDQPIDFSDLPIQVNWN 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5002NP_611262.1 SUL1 36..564 CDD:223732 139/605 (23%)
HCO3_cotransp 103..>385 CDD:304903 75/327 (23%)
STAS 469..>544 CDD:294402 17/117 (15%)
slc26a3.1NP_001129155.1 sulP 70..713 CDD:273284 138/603 (23%)
STAS_SulP_like_sulfate_transporter 528..707 CDD:132913 19/110 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0659
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252952at33208
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X49
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.