DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5002 and slc26a4

DIOPT Version :9

Sequence 1:NP_611262.1 Gene:CG5002 / 37025 FlyBaseID:FBgn0034275 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_017210528.1 Gene:slc26a4 / 563818 ZFINID:ZDB-GENE-060503-544 Length:779 Species:Danio rerio


Alignment Length:593 Identity:135/593 - (22%)
Similarity:268/593 - (45%) Gaps:109/593 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VTNKFPILKWLPRYRL-EYIMQDFIAGFTVGLTTIPQAIAYGVVAGLEPQYGLYSAFMGCFTYIV 96
            |....||::|||:|.: :::..|.::|.|.||....|.:||.::..:.|.|||||||....||.|
Zfish    56 VKGLLPIMEWLPKYPVKQWLPGDVVSGVTTGLVCCLQGVAYALLTSVAPVYGLYSAFFPILTYFV 120

  Fly    97 FGSCKDVTIATTAIMALMVNQYA-TISPD-----------------------------------Y 125
            .|:.:.:::....:..|||.... |::||                                   .
Zfish   121 LGTSRHISVGPFPVTCLMVGSVVLTLAPDEHFLRSVNMTDVNETMVEDTLMEVDVEAREAQRVMV 185

  Fly   126 AVLVCFLAGCIVLLLGLLNMGVLVRFISIPVITGFTMAAATTIGSAQINNIVGLTSPSNDLLPAW 190
            |..:..|.|.:.:.:||:.:|.|||::|.|::.|||.|||..:..:||..|:.:.:.:::     
Zfish   186 ACTMTVLVGLMQVAMGLMQVGFLVRYLSDPLVGGFTTAAAFHVFISQIKTILSVPTHNHN----- 245

  Fly   191 KNFF----------THLTSIRLWDALLGVSSLVFLLLMTRVKDI--KWGNRIFWKYLGLSRNALA 243
             .||          :::....:.|.:.|   |:.:.::..||:|  |:.::|   .:.:....:.
Zfish   246 -GFFSFAYTLIDVGSNINQANMADLIAG---LLTISIVMAVKEINTKFQHKI---PVPIPIEVIV 303

  Fly   244 VIFGTFLAYILSRDGNQPFRVTGNITAGVPPFRLP-PFSTTVDGEYVSFGEMISTVGASLGSIPL 307
            .:..:.:::::..:......:..|:..|   |..| |.:..:.|..:  |...||  |.:|....
Zfish   304 TVIASAISHVMDLNSQYGASIVHNLPRG---FASPQPPNIELIGSIL--GSSFST--AVVGYAVA 361

  Fly   308 ISILEIVAISKAFSKGKIVDASQEMVALGMCNIMGSFVLSMPVTGSFTRTAVNNASGVKTPLGGA 372
            :|:.::.|....::    |:.:||::|.|:.||.|....|...:.:.:||||..::|.|:.:.|.
Zfish   362 VSVAKVYAAKHDYT----VNGNQELIAFGVSNIFGGCFSSFVASTALSRTAVQESTGGKSQVAGL 422

  Fly   373 VTGALVLMALAFLTQTFYFIPKCTLAAIIIAAMISL-VELHKIKDMWKSKKKDLFPFVVTVLTCM 436
            ::..:|::.:..|......:.|..||.|:||.:..: :::.::..:|:..:.|.|.::.:.|..:
Zfish   423 ISAVMVMIVILALGPFLQPLQKSVLAGIVIANLKGMFLQISEVPVLWRQNRTDCFIWIASCLASV 487

  Fly   437 FWSLEYGILCGI----GANMVYILYSSAR-----PHVDI--------KLEKINGHEVSVVDVKQK 484
            ...|:.|:|.|:    |..:|...:.|..     |:.||        |:::|.|  |.:......
Zfish   488 VLGLDVGLLAGLVFEMGTVVVRTQFPSCATLGNVPNTDIYKNMKDYKKVDEIPG--VKIFKCNSP 550

  Fly   485 LDYASAEYLKEKVVRFLNNQNGETQLVVIK--GEEINSIDYTVAMNIVSMKGDLEALNCAMICWN 547
            :.:|:.:|.|||    |.::.|...:.|.|  .:.:..|...:      .||.|:.....::   
Zfish   551 IYFANIDYFKEK----LRDEVGFDAVRVFKKRNKALKKIHKLI------KKGKLQVTEAGLV--- 602

  Fly   548 WNIASAGV 555
             .:||.||
Zfish   603 -PVASLGV 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5002NP_611262.1 SUL1 36..564 CDD:223732 134/590 (23%)
HCO3_cotransp 103..>385 CDD:304903 66/330 (20%)
STAS 469..>544 CDD:294402 16/76 (21%)
slc26a4XP_017210528.1 sulP 61..724 CDD:273284 134/588 (23%)
STAS_SulP_like_sulfate_transporter 533..721 CDD:132913 21/93 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0659
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252952at33208
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1414
SonicParanoid 1 1.000 - - X49
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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