DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10931 and AT1G01660

DIOPT Version :9

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001321445.1 Gene:AT1G01660 / 839461 AraportID:AT1G01660 Length:569 Species:Arabidopsis thaliana


Alignment Length:44 Identity:11/44 - (25%)
Similarity:23/44 - (52%) Gaps:1/44 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 ASTSFDETVRLWDVRTGKTLKIVHAHQDPITSVDFHRDGNIFVT 198
            |::....:.:::|:::.|. |.|:.|......|.|..||::..|
plant   115 AASDHHYSEKMFDLKSRKA-KYVYQHAPSSCEVMFMCDGHLIYT 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <48..341 CDD:225201 11/44 (25%)
WD40 49..341 CDD:238121 11/44 (25%)
WD40 repeat 59..96 CDD:293791
WD40 repeat 102..137 CDD:293791
WD40 repeat 142..178 CDD:293791 4/22 (18%)
WD40 repeat 185..220 CDD:293791 5/14 (36%)
WD40 repeat 227..263 CDD:293791
WD40 repeat 271..309 CDD:293791
WD40 repeat 314..340 CDD:293791
AT1G01660NP_001321445.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D957291at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.