DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and Dtl

DIOPT Version :9

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_084042.1 Gene:Dtl / 76843 MGIID:1924093 Length:729 Species:Mus musculus


Alignment Length:430 Identity:88/430 - (20%)
Similarity:142/430 - (33%) Gaps:154/430 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LENSMSPGYAIKHSLLGHSGCVTGLKFSSNGEN--------------------LVSSSGDRLLKL 82
            |.|..|..|.::..|.|:. |....:.:|.||.                    |..::.:..::|
Mouse    15 LRNGWSSHYPLQSLLSGYQ-CNCNDEHTSYGETGVPVPPFGCTFCTAPSMEHILAVANEEGFVRL 78

  Fly    83 WD----LSATRCIQSLAGHGDGVNDVAWSAAGL-IASCSDDMTVRLWDARSKLCVKVLEGHSRYS 142
            ::    .|...|.:....|.:.|.|:||....| :.:.:.|.|.:.||.|:...:...:||....
Mouse    79 YNTESQTSKKTCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQTAKFWDVRAGELMGTCKGHQCSL 143

  Fly   143 FSCCFNP-QANLLASTSFDETVRLWDVRTGK-------TLKIVHAH------------------- 180
            .|..|.. |..:.::...|..:.:||.|..|       ..:|..||                   
Mouse   144 KSVAFPKFQKAVFSTGGRDGNIMIWDTRCNKKDGFYRQVNQISGAHNTADKQTPSKPKKKQNSKG 208

  Fly   181 -------QDPITSVDFHRDGNIFVTSSYDGLVRLWD----------------------------- 209
                   |..:|.|.|..:..:....:.||::::||                             
Mouse   209 LAPAVDSQQSVTVVLFQDENTLVSAGAVDGIIKVWDLRKNYTAYRQEPIASKSFLYPGTSTRKLG 273

  Fly   210 ------SSTGHVLKTLVDVDNI-----------PVG----------YVK--FSPNGRYILSSTLN 245
                  .|||..|......|||           ||.          |||  .||:.::::|.:.:
Mouse   274 YSSLVLDSTGSTLFANCTDDNIYMFNMTGLKTSPVAVFNGHQNSTFYVKSSLSPDDQFLISGSSD 338

  Fly   246 NTLRLWNYKKPKCMRT-YRGHLNEF----YCSNSNFSTTGGIWIVSGSEDNTLCIWNLQTRELVQ 305
            ....:|....|....| ..||..|.    :|. |:|:.     |.:.|:||||.||.| .|.|.:
Mouse   339 EAAYIWKVSMPWHPPTVLLGHSQEVTSVCWCP-SDFTK-----IATCSDDNTLKIWRL-NRGLEE 396

  Fly   306 KISTEGDQILSTHCHPTANVIASGALQNSYAIKIWKSSEK 345
            |   .||:                     ::|..|.|.:|
Mouse   397 K---PGDK---------------------HSIVGWTSQKK 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <48..341 CDD:225201 81/414 (20%)
WD40 49..341 CDD:238121 81/413 (20%)
WD40 repeat 59..96 CDD:293791 7/60 (12%)
WD40 repeat 102..137 CDD:293791 9/35 (26%)
WD40 repeat 142..178 CDD:293791 9/43 (21%)
WD40 repeat 185..220 CDD:293791 11/69 (16%)
WD40 repeat 227..263 CDD:293791 10/48 (21%)
WD40 repeat 271..309 CDD:293791 15/37 (41%)
WD40 repeat 314..340 CDD:293791 1/25 (4%)
DtlNP_084042.1 WD40 <37..403 CDD:225201 77/396 (19%)
WD 1 47..89 3/41 (7%)
WD40 repeat 53..96 CDD:293791 4/42 (10%)
WD40 65..389 CDD:295369 67/329 (20%)
WD 2 96..135 11/38 (29%)
WD40 repeat 102..138 CDD:293791 9/35 (26%)
WD 3 138..178 10/39 (26%)
WD40 repeat 143..199 CDD:293791 11/55 (20%)
DDB1-binding motif. /evidence=ECO:0000250 168..171 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..212 1/22 (5%)
Nuclear localization signal. /evidence=ECO:0000255 197..203 0/5 (0%)
WD 4 214..253 8/38 (21%)
WD40 repeat 219..267 CDD:293791 7/47 (15%)
DDB1-binding motif. /evidence=ECO:0000250 243..246 2/2 (100%)
WD 5 269..308 7/38 (18%)
WD40 repeat 274..312 CDD:293791 9/37 (24%)
WD 6 313..354 8/40 (20%)
WD40 repeat 320..357 CDD:293791 9/36 (25%)
WD 7 358..398 18/49 (37%)
WD40 repeat 363..388 CDD:293791 9/30 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 416..445
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 460..491
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 504..546
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 596..705
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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