DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and Cfap52

DIOPT Version :9

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_082239.2 Gene:Cfap52 / 71860 MGIID:1919110 Length:620 Species:Mus musculus


Alignment Length:222 Identity:46/222 - (20%)
Similarity:97/222 - (43%) Gaps:52/222 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VTGLKFSSNGENLVSSSGDRLLKLWDL---------------SATRCIQSLAGHGDGVNDVAWSA 108
            ||.:..:|:.:.::|..|:..:::|.:               |:..||:....:.:.|       
Mouse   420 VTAIATTSDCKRIISGGGEGEVRVWQVGCQTQKLEEALKEHKSSVSCIRVKKNNEECV------- 477

  Fly   109 AGLIASCSDDMTVRLWD----ARSKLCVKVLEGHSRYSFSC-CFNPQANLLASTSFDETVRLWDV 168
                 :.|.|.|..:||    .|:::.:      :...|.| |::|:...:.::..|..:..|:|
Mouse   478 -----TASTDGTCIIWDLVRLRRNQMIL------ANTLFQCVCYHPEEFQIITSGTDRKIAYWEV 531

  Fly   169 RTGKTLKIVHAH-QDPITSVDFHRDGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVDNIPVGY--- 229
            ..|..::.:... ...|..:|..::|..|||..:|.||::||.:.|       :|.::.||:   
Mouse   532 FDGSVIRELEGSLSGSINGMDITQEGGHFVTGGHDHLVKVWDYNEG-------EVTHVGVGHSGN 589

  Fly   230 ---VKFSPNGRYILSSTLNNTLRLWNY 253
               ::.||..:||:|.:.:..:..|.|
Mouse   590 IMAMRISPGNQYIVSVSADGAILRWKY 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <48..341 CDD:225201 46/222 (21%)
WD40 49..341 CDD:238121 46/222 (21%)
WD40 repeat 59..96 CDD:293791 9/51 (18%)
WD40 repeat 102..137 CDD:293791 6/38 (16%)
WD40 repeat 142..178 CDD:293791 8/36 (22%)
WD40 repeat 185..220 CDD:293791 11/34 (32%)
WD40 repeat 227..263 CDD:293791 9/33 (27%)
WD40 repeat 271..309 CDD:293791
WD40 repeat 314..340 CDD:293791
Cfap52NP_082239.2 WD40 10..399 CDD:225201
WD40 30..399 CDD:295369
WD 1 62..106
WD40 repeat 68..109 CDD:293791
WD 2 109..150
WD40 repeat 114..159 CDD:293791
WD 3 156..195
WD40 repeat 162..240 CDD:293791
WD40 repeat 257..302 CDD:293791
WD40 277..617 CDD:225201 46/222 (21%)
WD 4 288..327
WD 5 330..369
WD40 346..615 CDD:295369 44/219 (20%)
WD 6 372..411
WD40 repeat 380..414 CDD:293791
WD 7 415..454 6/33 (18%)
WD40 repeat 421..459 CDD:293791 5/37 (14%)
WD 8 459..498 10/50 (20%)
WD40 repeat 464..492 CDD:293791 8/39 (21%)
WD 9 500..541 8/46 (17%)
WD40 repeat 500..541 CDD:293791 8/46 (17%)
WD 10 543..582 13/45 (29%)
WD40 repeat 548..584 CDD:293791 13/42 (31%)
WD 11 585..620 8/32 (25%)
WD40 repeat 590..616 CDD:293791 6/25 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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