DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and wds

DIOPT Version :9

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001245503.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster


Alignment Length:303 Identity:168/303 - (55%)
Similarity:230/303 - (75%) Gaps:1/303 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SMSPGYAIKHSLLGHSGCVTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDGVNDVA 105
            |:.|.|.:|.:|.||:..|:.:|||.|||.|.|||.|:|:|:|.....:..::::||..|::|||
  Fly    57 SVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 121

  Fly   106 WSA-AGLIASCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWDVR 169
            ||: :.|:.|.|||.|:::|:..:...:|.|:|||.|.|.|.||||:||:.|.||||:||:||||
  Fly   122 WSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186

  Fly   170 TGKTLKIVHAHQDPITSVDFHRDGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVDNIPVGYVKFSP 234
            |||.||.:.||.||:::|.|:|||::.|:||||||.|:||:::|..||||:|.||.||.:|||||
  Fly   187 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 251

  Fly   235 NGRYILSSTLNNTLRLWNYKKPKCMRTYRGHLNEFYCSNSNFSTTGGIWIVSGSEDNTLCIWNLQ 299
            ||:|||::||:|||:||:|.|.||::||.||.||.||..:|||.|||.|||||||||.:.|||||
  Fly   252 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQ 316

  Fly   300 TRELVQKISTEGDQILSTHCHPTANVIASGALQNSYAIKIWKS 342
            ::|:|||:....|.:|.|.||||.|:|||.||:|...||:|||
  Fly   317 SKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <48..341 CDD:225201 162/293 (55%)
WD40 49..341 CDD:238121 162/292 (55%)
WD40 repeat 59..96 CDD:293791 15/36 (42%)
WD40 repeat 102..137 CDD:293791 14/35 (40%)
WD40 repeat 142..178 CDD:293791 24/35 (69%)
WD40 repeat 185..220 CDD:293791 19/34 (56%)
WD40 repeat 227..263 CDD:293791 23/35 (66%)
WD40 repeat 271..309 CDD:293791 25/37 (68%)
WD40 repeat 314..340 CDD:293791 15/25 (60%)
wdsNP_001245503.1 WD40 64..358 CDD:238121 162/293 (55%)
WD40 repeat 75..112 CDD:293791 15/36 (42%)
WD40 repeat 118..154 CDD:293791 14/35 (40%)
WD40 repeat 159..195 CDD:293791 24/35 (69%)
WD40 repeat 202..237 CDD:293791 19/34 (56%)
WD40 repeat 244..280 CDD:293791 23/35 (66%)
WD40 repeat 288..325 CDD:293791 25/36 (69%)
WD40 repeat 331..357 CDD:293791 15/25 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449907
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 238 1.000 Inparanoid score I823
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 1 1.010 - - D368256at33208
OrthoFinder 1 1.000 - - FOG0002159
OrthoInspector 1 1.000 - - otm46811
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22847
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.910

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