| Sequence 1: | NP_611261.1 | Gene: | CG10931 / 37024 | FlyBaseID: | FBgn0034274 | Length: | 345 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001102766.2 | Gene: | Poc1a / 501048 | RGDID: | 1565004 | Length: | 405 | Species: | Rattus norvegicus |
| Alignment Length: | 302 | Identity: | 87/302 - (28%) |
|---|---|---|---|
| Similarity: | 134/302 - (44%) | Gaps: | 55/302 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 47 AIKHSLLGHSGCVTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDGVNDVAWSAAG- 110
Fly 111 LIASCSDDMTVRLWDARSK-----------------LC--------------VKVLEGH-SRYSF 143
Fly 144 S---------CC-FNPQANLLASTSFDETVRLWDVRTGKTLKIVHA---HQDPITSVDFHRDGNI 195
Fly 196 FVTSSYDGLVRLWDSSTGHVLKTLVDVDNIPVGYVKFSPNGRYILSSTLNNTLRLWNYKKPKCMR 260
Fly 261 TYRGHLNEFYCSNSNFSTTGGIWIVSGSEDNTLCIW--NLQT 300 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG10931 | NP_611261.1 | WD40 | <47..340 | CDD:441893 | 87/302 (29%) |
| WD40 repeat | 59..96 | CDD:293791 | 11/36 (31%) | ||
| WD40 repeat | 102..137 | CDD:293791 | 17/66 (26%) | ||
| WD40 repeat | 142..178 | CDD:293791 | 15/45 (33%) | ||
| WD40 repeat | 185..220 | CDD:293791 | 13/34 (38%) | ||
| WD40 repeat | 227..263 | CDD:293791 | 8/35 (23%) | ||
| WD40 repeat | 271..309 | CDD:293791 | 10/32 (31%) | ||
| WD40 repeat | 314..340 | CDD:293791 | |||
| Poc1a | NP_001102766.2 | WD40 | <7..298 | CDD:441893 | 84/294 (29%) |
| WD40 repeat | 23..59 | CDD:293791 | 10/35 (29%) | ||
| WD40 repeat | 64..100 | CDD:293791 | 14/35 (40%) | ||
| WD40 repeat | 107..142 | CDD:293791 | 8/34 (24%) | ||
| WD40 repeat | 148..184 | CDD:293791 | 15/38 (39%) | ||
| WD40 repeat | 190..226 | CDD:293791 | 13/36 (36%) | ||
| WD40 repeat | 232..255 | CDD:293791 | 7/22 (32%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||