DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and Nwd1

DIOPT Version :9

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_006531149.1 Gene:Nwd1 / 319555 MGIID:2442268 Length:1573 Species:Mus musculus


Alignment Length:369 Identity:86/369 - (23%)
Similarity:141/369 - (38%) Gaps:93/369 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FDSFKMPML-PSQFHLENSMSPGYAIKHSLLG-HSGCVTGLKFSSNGENLVSSSGDRLLKLWDLS 86
            |.:...||| |....|:   .||..::.:|.| |.| :|.:.:|...:.||..:.|..:.:||:.
Mouse   848 FRACPYPMLVPLAGFLQ---PPGGPLRATLTGCHKG-ITAIAWSLEEKLLVVGTQDGAMVVWDVE 908

  Fly    87 ATRCIQSLAGHGDGVNDVAWSAAGLIA-SCSDDMTVRLWDARS-KLCVKVLEGHSR-----YSFS 144
            ..:.:..|.||...|..|...|.|.:| |.|.|.|:|||...| :..|.:|:|.|:     .|:.
Mouse   909 EQQVVHVLMGHTAEVKCVRVFAQGTLAISASKDHTLRLWSLLSGQEKVTILDGGSQNPTEPQSWD 973

  Fly   145 CCFNPQANLLASTSFDETVRLWDVRTGKTLKIVHAH-QDPITSVDFHRDGNIFVTSSYDGLVRLW 208
            ...:.:.|::.||| ...:.:|::.|.|.:..:... .||...|.......:.:..|..|.|.||
Mouse   974 LHVDERNNVVYSTS-GARINMWNLETSKLVFCITGDVSDPWVCVALLAAQGLLLALSKGGQVSLW 1037

  Fly   209 DSSTGHVLKTLVDVDNIPVGYVKFSPNGRYILSSTLNNTLRLWNYKKPKCMRTYRGHLNEFYCSN 273
            .|:.|.:.:                   ::.|||....|        |.|..:.:......    
Mouse  1038 SSAMGKLQE-------------------KHQLSSIKEET--------PTCAVSIQSRARLV---- 1071

  Fly   274 SNFSTTGGIWIVSGSEDNTLCIWNLQTRELVQKIS----TEGDQIL--------------STHCH 320
            :.|| :|.|.:||..||..|       .:|.:.:.    :|.|.:|              |...|
Mouse  1072 AGFS-SGSIALVSAGEDRLL-------EKLPEAVGFLVVSEDDSLLVAGFGRFVRIFLADSQGFH 1128

  Fly   321 -------------------PTANVIASGALQNSYAIKIWKSSEK 345
                               |..|:|.:|:  ....|::|..||:
Mouse  1129 RFMASDLEHEDMVETAVLGPENNLIITGS--RDALIQVWSLSEQ 1170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <48..341 CDD:225201 75/338 (22%)
WD40 49..341 CDD:238121 75/337 (22%)
WD40 repeat 59..96 CDD:293791 8/36 (22%)
WD40 repeat 102..137 CDD:293791 14/36 (39%)
WD40 repeat 142..178 CDD:293791 8/35 (23%)
WD40 repeat 185..220 CDD:293791 8/34 (24%)
WD40 repeat 227..263 CDD:293791 6/35 (17%)
WD40 repeat 271..309 CDD:293791 10/41 (24%)
WD40 repeat 314..340 CDD:293791 8/58 (14%)
Nwd1XP_006531149.1 AAA 315..>361 CDD:99707
P-loop_NTPase 337..504 CDD:393355
WD40 870..1166 CDD:392136 75/338 (22%)
WD40 repeat 881..918 CDD:293791 8/36 (22%)
WD40 repeat 924..961 CDD:293791 14/36 (39%)
WD40 repeat 966..1006 CDD:293791 8/40 (20%)
WD40 repeat 1014..1051 CDD:293791 8/55 (15%)
WD40 1038..1471 CDD:225201 31/174 (18%)
WD40 repeat 1097..1134 CDD:293791 5/36 (14%)
WD40 repeat 1141..1165 CDD:293791 5/25 (20%)
WD40 repeat 1183..1216 CDD:293791
WD40 repeat 1269..1307 CDD:293791
WD40 repeat 1312..1347 CDD:293791
WD40 repeat 1362..1393 CDD:293791
WD40 repeat 1401..1439 CDD:293791
WD40 repeat 1446..1483 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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