DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and Wdr13

DIOPT Version :9

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_006256781.2 Gene:Wdr13 / 317370 RGDID:1560982 Length:485 Species:Rattus norvegicus


Alignment Length:342 Identity:78/342 - (22%)
Similarity:141/342 - (41%) Gaps:42/342 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ENSMSPGYA---IKHSLLGH-SGCVTGLKFSSNGEN-LVSSSGDRLLKLWDL--SATRCIQSLAG 96
            :.|:|..||   :.|....| ...|..::|:::..: |...|.|..:.|..|  :....:..|.|
  Rat   151 DTSLSENYAFAGMYHVFDQHVDEAVPRVRFANDDRHRLACCSLDGSISLCQLVPAPPTVLHVLRG 215

  Fly    97 HGDGVNDVAWSAAG-LIASCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCC-FNP-QANLLASTS 158
            |..||:|.|||.:. ::.|.|.|.|:|:|.:....|::.:.........|| |.| ..||....:
  Rat   216 HTRGVSDFAWSLSNDILVSTSLDATMRIWASEDGRCIREIPDPDGAELLCCTFQPVNNNLTVVGN 280

  Fly   159 FDETVRLWDVRTGKTLKIVHAHQDPIT----SVDFHRDGNIFVTSSYDGLV--RLWDSSTGHVLK 217
            ....|.:.::.|||.:|   .....:|    ::.|...|.:.......|.|  .|:|.:||.:.|
  Rat   281 AKHNVHVMNISTGKKVK---GGSSKLTGRVLALSFDAPGRLLWAGDDRGSVFSFLFDMATGKLTK 342

  Fly   218 T--LVDVDNIPV------GYVKFSPNGRYILSSTLNNTLRLW----NYKKPKCMRTY----RGH- 265
            .  ||..:..||      .:|........:|.:...|.|.|:    |....:..|::    ..| 
  Rat   343 AKRLVVHEGSPVTSISARSWVSREARDPSLLINACLNKLLLYRVVDNEGALQLKRSFPIEQSSHP 407

  Fly   266 LNEFYCSNSNFSTTGGIWIVSGSEDNTLCIWNLQ--TRELVQKISTEGDQILSTHCHPTANVIAS 328
            :...:|...:|..  |..:|:||||..:..::::  .:..|.|:......:|....:...:::||
  Rat   408 VRSIFCPLMSFRQ--GACVVTGSEDMCVHFFDVERAAKAAVNKLQGHSAPVLDVSFNCDESLLAS 470

  Fly   329 GALQNSYAIKIWKSSEK 345
            .  ..|..:.:|:..:|
  Rat   471 S--DASGMVIVWRREQK 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <48..341 CDD:225201 72/324 (22%)
WD40 49..341 CDD:238121 72/323 (22%)
WD40 repeat 59..96 CDD:293791 8/39 (21%)
WD40 repeat 102..137 CDD:293791 11/35 (31%)
WD40 repeat 142..178 CDD:293791 11/37 (30%)
WD40 repeat 185..220 CDD:293791 10/42 (24%)
WD40 repeat 227..263 CDD:293791 8/49 (16%)
WD40 repeat 271..309 CDD:293791 10/39 (26%)
WD40 repeat 314..340 CDD:293791 4/25 (16%)
Wdr13XP_006256781.2 WD40 <165..485 CDD:225201 73/326 (22%)
WD40 repeat 221..257 CDD:293791 11/35 (31%)
WD40 repeat 263..300 CDD:293791 11/39 (28%)
WD40 repeat 308..347 CDD:293791 9/38 (24%)
WD40 repeat 354..400 CDD:293791 8/45 (18%)
WD40 repeat 408..450 CDD:293791 10/43 (23%)
WD40 repeat 456..480 CDD:293791 4/25 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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