DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and Wdr27

DIOPT Version :9

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_008757027.1 Gene:Wdr27 / 308222 RGDID:1309633 Length:818 Species:Rattus norvegicus


Alignment Length:324 Identity:69/324 - (21%)
Similarity:127/324 - (39%) Gaps:73/324 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDGVNDVAWS-AAGLIASCSDDMTVR 122
            ||.|:||.:|:.|....|:.|..::|.|.:....:.:||...||.|.|| ....:.|.:.|.|:|
  Rat   507 VTCLQFSGDGQQLACGLGNHLSLVFDASLSGAPAAFSGHDGAVNTVCWSHDKRWLLSTARDRTLR 571

  Fly   123 LWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWD---------VRTGKTLKIVH 178
            :|..            .|..|       ..|||:.:|.:.|....         :.:|....::.
  Rat   572 VWSV------------PRTEF-------VMLLAADAFPKPVASAQFYYMDTFILLSSGPEFCLLK 617

  Fly   179 AHQD---------------------PITSV----------DFHRDGNIFVTSSYDGLVRLWDSST 212
            .|.|                     |.||.          ||:  .:|.:|:..|..|.::|.:.
  Rat   618 YHIDLCRDDIRRYKPKSRYKPIFRLPTTSAADITSLSAVNDFY--SHIILTAGRDRTVEVFDLNA 680

  Fly   213 GHVLKTLVDVDNIPVGYVKFSPNGRYI----------LSSTLNNTLRLWNYKKPKCMRTYRGHLN 267
            |.....|.:|.:.||..:..:....:|          |::.:.:.:|||:.:..:|:|.:.||.|
  Rat   681 GCSAAVLAEVHSRPVHRICQNKGSSFIAQQSLAYNLFLTTAVGDGVRLWDLRNLRCVRCFEGHPN 745

  Fly   268 EFYCSNSNFSTTGGIWIVSGSEDNTLCIWNLQTRELVQKISTEGDQILSTHCHPTANVIASGAL 331
            ..|.....||..|.: :..|:||....::.:.:...:.:::...|.:.....:|.|:.:.:..|
  Rat   746 RSYPCGVAFSPCGKL-MACGAEDRHAYVYEMGSSSFLYRLAGHTDTVTEVAFNPAASQLITATL 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <48..341 CDD:225201 69/324 (21%)
WD40 49..341 CDD:238121 69/324 (21%)
WD40 repeat 59..96 CDD:293791 11/36 (31%)
WD40 repeat 102..137 CDD:293791 9/35 (26%)
WD40 repeat 142..178 CDD:293791 7/44 (16%)
WD40 repeat 185..220 CDD:293791 10/44 (23%)
WD40 repeat 227..263 CDD:293791 8/45 (18%)
WD40 repeat 271..309 CDD:293791 6/37 (16%)
WD40 repeat 314..340 CDD:293791 3/18 (17%)
Wdr27XP_008757027.1 WD40 <45..229 CDD:421866
WD40 repeat 67..112 CDD:293791
WD40 repeat 120..154 CDD:293791
WD40 repeat 160..193 CDD:293791
WD40 repeat 204..230 CDD:293791
WD40 508..815 CDD:421866 68/323 (21%)
WD40 repeat 508..544 CDD:293791 10/35 (29%)
WD40 repeat 550..632 CDD:293791 19/100 (19%)
WD40 repeat 650..688 CDD:293791 8/39 (21%)
WD40 repeat 696..741 CDD:293791 7/44 (16%)
WD40 repeat 749..785 CDD:293791 6/36 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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